DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002551
GeneAnkrd27
SynonymsVarp
Desc.ankyrin repeat domain 27 (VPS9 domain)
LocusNM_145633 chr7:36371266-36424256(+)
NM_178263 chr7:36371266-36394133(+)
DB links


Entrez 245886
MGI 2444103
Ensembl ENSMUSG00000034867
Featureprotein-coding
GO(BP)
  •   2 Terms
      early endosome to late endosome transport (GO:0045022)
      regulation of catalytic activity (GO:0050790)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002438
(v2.0)
Ankrd27NM_145633,NM_178263245886
3.7597439.138841.73035.849685.348358.905712.678341.01716.563769.42616
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002551
(v1.0)
Ankrd27245886
Maternal RNA0.98207
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002438
(v2.0)
Ankrd27245886
808/4920.2025492/492-0.116218/4922.3982600/4921.6126310/4921.38391867/4921.3229
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002438
(v2.0)
Ankrd27245886
477/1950.7746234/1950.1461213/1953.6481520/1952.7306132/1951.4753820/1951.4681
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002438
(v2.0)
Ankrd27245886
74.624920736.05
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002438
(v2.0)
Ankrd27245886
12.75681289.97
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002551
(v1.0)
Ankrd27NM_145633,NM_178263245886
40.653628.89614.379473.691498.95264
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002551
(v1.0)
Ankrd27NM_145633,NM_178263245886
1455912.733170.733150.785158.97
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002551
(v1.0)
Ankrd27NM_145633,NM_178263245886
42.50711.3748931.5263
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002551
(v1.0)
Ankrd27NM_145633,NM_178263245886
41.491128.60630.3619
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002551
(v1.0)
Ankrd27NM_145633,NM_178263245886
617.698480.699
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002551
(v1.0)
Ankrd27NM_145633,NM_178263245886
42.53181.3560633.2999
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002551
(v1.0)
Ankrd27NM_145633,NM_178263245886
4.054713.564284.55754
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002551
(v1.0)
Ankrd27NM_145633,NM_178263245886
54.541569.0395
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002551
(v1.0)
Ankrd27NM_145633,NM_178263245886
46.36381.79939
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002551
(v1.0)
Ankrd27NM_145633,NM_178263245886
0.7680531.21541
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002551
(v1.0)
1454717_atMm.272620Ankrd27NM_145633.3,NM_178263.3245886
1508.8251241.325972.175406.4691.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002551
(v1.0)
A_52_P1333Ankrd27AK131117245886
11P0.4560.0825P
Proteome N/A