DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002564
GeneAnkrd40
SynonymsGcap15
Desc.ankyrin repeat domain 40
LocusNM_146024 chr11:94189315-94200823(+)
NM_027799 chr11:94189315-94203161(+)
DB links


Entrez 71452
MGI 1918702
Ensembl ENSMUSG00000020864
Vega OTTMUSG00000001717
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002451
(v2.0)
Ankrd40NM_027799,NM_14602471452
32.439934.166741.529532.200821.054910.750323.083445.802416.940110.9082
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002564
(v1.0)
Ankrd4071452
Minor ZGA0.87565
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002451
(v2.0)
Ankrd4071452
624/4140.0789400/414-0.165474/4141.0947173/4140.07235/414-1.4802236/414-1.4044
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002451
(v2.0)
Ankrd4071452
273/1440.4076169/1440.11468/1442.4229152/1441.39387/144-2.153366/144-1.7021
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002451
(v2.0)
Ankrd4071452
44.452210343.16
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002451
(v2.0)
Ankrd4071452
12.2786618.6
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002564
(v1.0)
Ankrd40NM_027799,NM_14602471452
35.521628.369924.019114.485316.3588
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002564
(v1.0)
Ankrd40FR291255,NM_027799,NM_14602471452
45.267846.238660.230638.472130.7899
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002564
(v1.0)
Ankrd40NM_027799,NM_14602471452
37.141111.862130.9521
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002564
(v1.0)
Ankrd40NM_027799,NM_14602471452
36.253428.08533.8797
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002564
(v1.0)
Ankrd40FR291255,NM_027799,NM_14602471452
33.056740.9904
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002564
(v1.0)
Ankrd40NM_027799,NM_14602471452
37.162711.699637.1581
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002564
(v1.0)
Ankrd40NM_027799,NM_14602471452
22.23813.986211.7402
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002564
(v1.0)
Ankrd40FR291255,NM_027799,NM_14602471452
17.8215.1262
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002564
(v1.0)
Ankrd40NM_027799,NM_14602471452
22.407910.3646
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002564
(v1.0)
Ankrd40NM_027799,NM_14602471452
13.586410.0146
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002564
(v1.0)
11021H3107B05-3Mm.1410545530600A18Rik71452
U043215NAP023662-0015530600A18Rik;TC935739Q9CU71U,F,23.35343.18283.1563.0663.51733.30793.3719
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002564
(v1.0)
1453744_a_atMm.141054Ankrd40NM_027799.2,NM_146024.171452
40.903800
0002564
(v1.0)
1435322_atMm.141054Ankrd40NM_027799.2,NM_146024.171452
102.5165.525146.27500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002564
(v1.0)
A_51_P335350Ankrd40NM_02779971452
11P1.4540.167P
Proteome N/A