DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002639
GeneAp3b1
SynonymsAP-3
beta3A
Hps2
recombination induced mutation 2
rim2
Desc.adaptor-related protein complex 3, beta 1 subunit
LocusNM_009680 chr13:95128915-95336271(+)
DB links


Entrez 11774
MGI 1333879
Ensembl ENSMUSG00000021686
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002528
(v2.0)
Ap3b1NM_00968011774
21.737918.55321.48935.284849.6161613.660714.427317.11149.0839913.5552
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002639
(v1.0)
Ap3b111774
Minor ZGA0.90794
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002528
(v2.0)
Ap3b111774
581/3870.0732408/387-0.0399118/3871.8552269/3870.802644/387-1.062300/387-0.9632
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002528
(v2.0)
Ap3b111774
310/1900.1925187/190-0.1384111/1902.7493247/1901.69667/190-2.543364/190-2.143
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002528
(v2.0)
Ap3b111774
52.869612442.64
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002528
(v2.0)
Ap3b111774
12.39828115.31
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002639
(v1.0)
Ap3b1NM_00968011774
19.281114.92263.931636.680849.99901
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002639
(v1.0)
Ap3b1NM_00968011774
267.689466.176198.707289.742124.938
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002639
(v1.0)
Ap3b1NM_00968011774
20.16027.9497816.2809
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002639
(v1.0)
Ap3b1NM_00968011774
19.678314.772712.6891
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002639
(v1.0)
Ap3b1NM_00968011774
797.49170.4381
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002639
(v1.0)
Ap3b1NM_00968011774
20.17197.8408913.9169
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002639
(v1.0)
Ap3b1NM_00968011774
3.640086.450626.2748
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002639
(v1.0)
Ap3b1NM_00968011774
263.878160.169
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002639
(v1.0)
Ap3b1NM_00968011774
29.10191.05769
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002639
(v1.0)
Ap3b1NM_00968011774
4.251014.20285
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002639
(v1.0)
15228K0113H04-3Mm.21185Ap3b111774
U015128NAP098082-001Ap3b1;TC853623Q91YR43.07182.94732.98712.80182.65143.04443.0215
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002639
(v1.0)
1423235_atMm.21185Ap3b1NM_009680.311774
479.8446.225385.725308.85610.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002639
(v1.0)
A_51_P119597Ap3b1NM_00968011774
11P1.0290.825P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002639
(v1.0)
Ap3b111774
140140