DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0002679

Gene

Aplp2

Synonyms

Description

amyloid beta (A4) precursor-like protein 2

Locus

NM_009691 UCSC: chr9:30957142-31019400(-) OLP: chr9:30957142-31019400(-)
NM_001102455 UCSC: chr9:30957142-31019400(-) OLP: chr9:30957142-31019400(-)
NM_001102456 UCSC: chr9:30957142-31019400(-) OLP: chr9:30957142-31019400(-)

DB links

Entrez 11804
MGI 88047
Ensembl ENSMUSG00000031996

Feature

protein-coding

GO_BP

12 Terms

GO_MF

5 Terms

GO_CC

4 Terms

KEGG

see DBTMEE:2002569 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0002679 (v1.0)	Aplp2	NM_001102455,NM_001102456,NM_009691	11804	25.5616	14.6014	39.5599	28.4408	65.3971

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0002679 (v1.0)	Aplp2	NM_001102455,NM_001102456,NM_009691	11804	26.727	47.6751	15.9304

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0002679 (v1.0)	Aplp2	NM_001102455,NM_001102456,NM_009691	11804	26.0882	14.4548	14.4696

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0002679 (v1.0)	Aplp2	NM_001102455,NM_001102456,NM_009691	11804	26.7425	47.0221	15.8698

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0002679 (v1.0)	Aplp2	NM_001102455,NM_001102456,NM_009691	11804	36.6263	27.4607	28.3277

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0002679 (v1.0)	Aplp2	NM_001102455,NM_001102456,NM_009691	11804	18.122	33.35

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0002679 (v1.0)	Aplp2	NM_001102455,NM_001102456,NM_009691	11804	6.91067	5.5047

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0002679 (v1.0)	15044	J1013D10-3	Mm.19133	Aplp2	11804	U030644	NAP093703-001		TC931685,TC931684	Q06335	U,F,2	3.2633	3.2029	3.0507	3.1613	3.5429	3.3217	3.4404
0002679 (v1.0)	19670	L0288G02-3	Mm.19133	Aplp2	11804	U030644	NAP093703-001	Aplp2;Wistar;	TC931684,TC874999,TC863230	Q06335	U,F,2	3.7889	3.6877	3.6774	3.683	3.7652	3.739	3.7551

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0002679 (v1.0)	1421887_a_at	Mm.19133	Aplp2	NM_001102455.1,NM_001102456.1,NM_009691.2	11804	713.6	1447.85	1289.82	1743.9	630.075
0002679 (v1.0)	1423739_x_at	Mm.19133	Aplp2	NM_001102455.1,NM_001102456.1,NM_009691.2	11804	209.725	311.6	303.275	343.75	549.1

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0002679 (v1.0)	A_51_P237599	Aplp2	NM_009691	11804	1	1	P	1.291	0.237	P
0002679 (v1.0)	A_52_P559770	Aplp2	NM_009691	11804	1	1	P	0.993	0.978	P

N/A