DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002739
GeneAraf
SynonymsA-Raf
Araf1
Desc.v-raf murine sarcoma 3611 viral oncogene homolog
LocusNM_009703 chrX:20425669-20437647(+)
NM_001159645 chrX:20425669-20430031(+)
DB links


Entrez 11836
MGI 88065
Ensembl ENSMUSG00000001127
Vega OTTMUSG00000017167
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002629
(v2.0)
ArafNM_001159645,NM_00970311836
31.697211.07516.88720.75324.592928.939927.241623.937329.483331.1847
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002739
(v1.0)
Araf11836
MGA0.98748
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002629
(v2.0)
Araf11836
380/2050.3759246/2050.1462108/2052.6068381/2052.211633/205-0.5632269/205-0.2063
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002629
(v2.0)
Araf11836
185/890.5378119/890.2998106/893.6824332/893.194713/89-0.676648/89-1.4614
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002629
(v2.0)
Araf11836
56.66349360.93
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002629
(v2.0)
Araf11836
14.66874731.21
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002739
(v1.0)
ArafNM_001159645,NM_00970311836
11.538311.710915.451917.041619.148
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002739
(v1.0)
ArafNM_001159645,NM_00970311836
97.0849114.256133.65298.334186.026
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002739
(v1.0)
ArafNM_001159645,NM_00970311836
12.064311.59212.7769
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002739
(v1.0)
ArafNM_001159645,NM_00970311836
11.77611.593317.7389
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002739
(v1.0)
ArafNM_001159645,NM_00970311836
130.137228.141
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002739
(v1.0)
ArafNM_001159645,NM_00970311836
12.071311.433319.4554
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002739
(v1.0)
ArafNM_001159645,NM_00970311836
14.30616.454320.3542
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002739
(v1.0)
ArafNM_001159645,NM_00970311836
105.958175.218
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002739
(v1.0)
ArafNM_001159645,NM_00970311836
3.465498.79929
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002739
(v1.0)
ArafNM_001159645,NM_00970311836
0.4590090.394727
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002739
(v1.0)
20114L0522C08-3Mm.220946U019753NAP012642-001Araf;TC799669,TC799668P046273.393.32893.00533.28463.09163.18653.2742
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002739
(v1.0)
1426602_atMm.220946ArafNM_009703.2,NM_001159645.111836
0000129.575
0002739
(v1.0)
1428607_atMm.220946ArafNM_009703.2,NM_001159645.111836
35.424.52537.17575.6581.775
0002739
(v1.0)
1445693_atMm.220946ArafNM_009703.2,NM_001159645.111836
00166.675253.625390.675
0002739
(v1.0)
1440764_atMm.220946ArafNM_009703.2,NM_001159645.111836
0000111.95
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002739
(v1.0)
A_51_P301259ArafNM_00970311836
11P1.5070.157P
Proteome N/A