DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002748
GeneArf3
Synonyms
Desc.ADP-ribosylation factor 3
LocusNM_007478 chr15:98568057-98593549(-)
DB links


Entrez 11842
MGI 99432
Ensembl ENSMUSG00000051853
Vega OTTMUSG00000017016
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002639
(v2.0)
Arf3NM_00747811842
96.866478.2549216.353.38932.549429.919271.4933270.01234.787529.7548
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002748
(v1.0)
Arf311842
Minor ZGA0.95863
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002639
(v2.0)
Arf311842
860/4670.3674493/467-0.038134/4671.7736317/4670.769198/467-0.1929688/467-0.0403
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002639
(v2.0)
Arf311842
494/1990.7959284/1990.3952124/1992.8448296/1991.890938/199-0.3233297/199-0.0215
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002639
(v2.0)
Arf311842
93.527218051.96
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002639
(v2.0)
Arf311842
23.483110721.95
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002748
(v1.0)
Arf3NM_00747811842
81.3794150.29239.75122.531650.502
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002748
(v1.0)
Arf3NM_00747811842
113.249201.19453.060628.940367.2286
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002748
(v1.0)
Arf3NM_00747811842
85.089635.425163.972
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002748
(v1.0)
Arf3NM_00747811842
83.0559148.783200.022
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002748
(v1.0)
Arf3NM_00747811842
218.046308.803
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002748
(v1.0)
Arf3NM_00747811842
85.13934.9398219.377
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002748
(v1.0)
Arf3NM_00747811842
36.803221.755224.1347
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002748
(v1.0)
Arf3NM_00747811842
30.629232.84
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002748
(v1.0)
Arf3NM_00747811842
642.3736.60378
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002748
(v1.0)
Arf3NM_00747811842
6.642410.6114
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002748
(v1.0)
12784H3152C07-3Mm.221298Arf311842
U036628NAP013813-001Q9D3N9U,F,23.5683.55773.3923.47783.52283.47383.4785
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002748
(v1.0)
1423973_a_atMm.221298Arf3NM_007478.311842
278.9341.75243.3750239.525
0002748
(v1.0)
1437331_a_atMm.221298Arf3NM_007478.311842
347.025387.025226.95135.375252.6
0002748
(v1.0)
1434787_atMm.221298Arf3NM_007478.311842
000074.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002748
(v1.0)
A_51_P200068Arf3NM_00747811842
11P0.5940.131P
0002748
(v1.0)
A_52_P375876Arf3NM_00747811842
11P0.8370.325P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002748
(v1.0)
Arf311842
795313415