DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002750
GeneArf5
Synonyms
Desc.ADP-ribosylation factor 5
LocusNM_007480 chr6:28373640-28376499(+)
DB links


Entrez 11844
MGI 99434
Ensembl ENSMUSG00000020440
Vega OTTMUSG00000021282
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002641
(v2.0)
Arf5NM_00748011844
86.709440.074479.171114.06519.1653129.91186.357688.727918.1412131.574
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002750
(v1.0)
Arf511844
Minor ZGA0.97757
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002641
(v2.0)
Arf511844
1053/5550.4105655/5550.12262246/5555.58734987/5554.492785/555-0.6431412/555-1.0265
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002641
(v2.0)
Arf511844
394/1890.5446225/1890.1347835/1895.65641810/1894.57258/189-2.36660/189-2.2263
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002641
(v2.0)
Arf511844
87.745818347.95
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002641
(v2.0)
Arf511844
21.11576831.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002750
(v1.0)
Arf5NM_00748011844
41.668255.208810.481513.287461.498
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002750
(v1.0)
Arf5NM_00748011844
419.201459.39353.941390.0594550.432
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002750
(v1.0)
Arf5NM_00748011844
43.567931.710560.234
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002750
(v1.0)
Arf5NM_00748011844
42.526654.654465.9226
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002750
(v1.0)
Arf5NM_00748011844
284.784295.371
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002750
(v1.0)
Arf5NM_00748011844
43.593231.276272.3017
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002750
(v1.0)
Arf5NM_00748011844
9.7042112.829512.5198
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002750
(v1.0)
Arf5NM_00748011844
102.628168.601
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002750
(v1.0)
Arf5NM_00748011844
0.6124070.14821
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002750
(v1.0)
Arf5NM_00748011844
25.07845.32378
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002750
(v1.0)
Arf511844
10125303414