DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002755
GeneArfgef1
SynonymsARFGEP1
BIG1
P200
Desc.ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)
LocusNM_001102430 chr1:10127588-10222751(-)
DB links


Entrez 211673
MGI 2442988
Ensembl ENSMUSG00000067851
Vega OTTMUSG00000033923
Featureprotein-coding
GO(BP)
GO(MF)
  •   4 Terms
      guanyl-nucleotide exchange factor activity (GO:0005085)
      ARF guanyl-nucleotide exchange factor activity (GO:0005086)
      myosin binding (GO:0017022)
      protein kinase A regulatory subunit binding (GO:0034237)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002646
(v2.0)
Arfgef1NM_001102430211673
13.693475.82144.856107.84837.04516.3262618.6487104.97440.04525.50349
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002755
(v1.0)
Arfgef1211673
Minor ZGA0.93488
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002646
(v2.0)
Arfgef1211673
809/3440.7193621/3440.7343492/3444.07021510/3443.455853/344-0.6309322/344-0.6921
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002646
(v2.0)
Arfgef1211673
479/1411.2456317/1411.0473441/1415.13031236/1414.43886/141-2.316493/141-1.1866
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002646
(v2.0)
Arfgef1211673
41.908911436.76
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002646
(v2.0)
Arfgef1211673
10.84417813.9
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002755
(v1.0)
Arfgef1NM_001102430211673
78.792899.955780.226625.648512.9791
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002755
(v1.0)
Arfgef1NM_001102430211673
433.988486.705462.087148.84481.495
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002755
(v1.0)
Arfgef1NM_001102430211673
82.38515.00781109.054
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002755
(v1.0)
Arfgef1NM_001102430211673
80.41698.95277.565
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002755
(v1.0)
Arfgef1NM_001102430211673
1355.95973.858
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002755
(v1.0)
Arfgef1NM_001102430211673
82.4334.9392285.0707
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002755
(v1.0)
Arfgef1NM_001102430211673
74.277424.764627.6858
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002755
(v1.0)
Arfgef1NM_001102430211673
429.614450.849
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002755
(v1.0)
Arfgef1NM_001102430211673
62.063282.9673
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002755
(v1.0)
Arfgef1NM_001102430211673
13.915122.661
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002755
(v1.0)
1415711_atMm.229141Arfgef1NM_001102430.1211673
729.6251127.6251171.65208.8439.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002755
(v1.0)
A_51_P374772Arfgef1XM_129376211673
11P0.6470.145P
0002755
(v1.0)
A_52_P513439Arfgef1XM_129376211673
11P0.9740.838P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002755
(v1.0)
Arfgef1211673
131131