DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002757
GeneArfip1
SynonymsArfaptin
D3Ertd598e
Desc.ADP-ribosylation factor interacting protein 1
LocusNM_001081093 chr3:84299986-84386547(-)
DB links


Entrez 99889
MGI 1277120
Ensembl ENSMUSG00000074513
Vega OTTMUSG00000032734
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002648
(v2.0)
Arfip1NM_00108109399889
10.8874240.963319.291132.19243.47611.220225.5068150.80243.583412.1579
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002757
(v1.0)
Arfip199889
Maternal RNA0.89519
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002648
(v2.0)
Arfip199889
758/3940.4302459/3940.1038203/3942.6077452/3941.523462/394-0.6022330/394-0.8521
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002648
(v2.0)
Arfip199889
417/1690.7866217/1690.2431196/1693.7222423/1692.6379/169-2.056370/169-1.8486
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002648
(v2.0)
Arfip199889
54.001812343.9
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002648
(v2.0)
Arfip199889
13.76848017.21
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002757
(v1.0)
Arfip1NM_00108109399889
250.365220.39998.403230.139818.0794
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002757
(v1.0)
Arfip1FR310981,FR356066,NM_00108109399889
7654.482872.121325.17227.802183.75
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002757
(v1.0)
Arfip1NM_00108109399889
261.7793.98162240.46
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002757
(v1.0)
Arfip1NM_00108109399889
255.522218.186111.706
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002757
(v1.0)
Arfip1FR310981,FR356066,NM_00108109399889
245.886129.362
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002757
(v1.0)
Arfip1NM_00108109399889
261.9313.92709122.516
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002757
(v1.0)
Arfip1NM_00108109399889
91.10629.101130.1535
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002757
(v1.0)
Arfip1FR310981,FR356066,NM_00108109399889
36.013436.9779
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002757
(v1.0)
Arfip1NM_00108109399889
319.7343.9927
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002757
(v1.0)
Arfip1NM_00108109399889
69.463126.846
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002757
(v1.0)
9524H3082G06-3Mm.27129AW12308799889
U040987NAP098962-001AW123087;TC831958U,F,24.40874.38553.32013.19383.01233.08293.1785
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002757
(v1.0)
1454916_s_atMm.316536Arfip1NM_001081093.199889
10562.1514062.8756548.1751136.952226.025
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002757
(v1.0)
A_51_P440885Arfip1XM_13098599889
11P0.8940.47P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002757
(v1.0)
Arfip199889
143165