DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002766
GeneArhgap12
Synonyms
Desc.Rho GTPase activating protein 12
LocusNM_029277 chr18:6024448-6136096(-)
NM_001039692 chr18:6024448-6136096(-)
DB links


Entrez 75415
MGI 1922665
Ensembl ENSMUSG00000041225
Vega OTTMUSG00000036618
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002657
(v2.0)
Arhgap12NM_001039692,NM_02927775415
5.7060466.570578.001638.032713.90116.29676.497257.414815.367515.429
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002766
(v1.0)
Arhgap1275415
Maternal RNA0.88948
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002657
(v2.0)
Arhgap1275415
693/3440.4964496/3440.4107910/3444.95612376/3444.109438/344-1.1004225/344-1.2063
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002657
(v2.0)
Arhgap1275415
399/1720.6979273/1720.5476881/1725.86112079/1724.906415/172-1.40374/172-1.7953
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002657
(v2.0)
Arhgap1275415
46.773814632.04
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002657
(v2.0)
Arhgap1275415
6.06571035.89
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002766
(v1.0)
Arhgap12NM_001039692,NM_02927775415
69.17753.885528.2869.643154.54591
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002766
(v1.0)
Arhgap12FR064850,FR145945,FR195468,NM_001039692,NM_02927775415
393.403492.957210.90451.7619.0956
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002766
(v1.0)
Arhgap12NM_001039692,NM_02927775415
72.33092.0867658.7903
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002766
(v1.0)
Arhgap12NM_001039692,NM_02927775415
70.602153.344542.4926
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002766
(v1.0)
Arhgap12FR064850,FR145945,FR195468,NM_001039692,NM_02927775415
810.204290.642
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002766
(v1.0)
Arhgap12NM_001039692,NM_02927775415
72.37292.0581846.6044
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002766
(v1.0)
Arhgap12NM_001039692,NM_02927775415
26.18849.3108510.6449
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002766
(v1.0)
Arhgap12FR064850,FR145945,FR195468,NM_001039692,NM_02927775415
56.674761.6461
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002766
(v1.0)
Arhgap12NM_001039692,NM_02927775415
214.24227.7007
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002766
(v1.0)
Arhgap12NM_001039692,NM_02927775415
17.506346.3917
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002766
(v1.0)
1451525_atMm.239675Arhgap12NM_001039692.1,NM_029277.275415
509.825623.8208.775051.8
0002766
(v1.0)
1431052_atMm.239675Arhgap12NM_001039692.1,NM_029277.275415
234.025280.05161.200
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002766
(v1.0)
A_51_P214837Arhgap12NM_02927775415
11P0.8320.317P
0002766
(v1.0)
A_52_P682415Arhgap12NM_02927775415
11P1.2410.279P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002766
(v1.0)
Arhgap1275415
141141