DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002789
GeneArhgap42
Synonyms
Desc.Rho GTPase activating protein 42
LocusNM_027823 chr9:8994953-9239013(-)
DB links


Entrez 71544
MGI 1918794
Ensembl ENSMUSG00000050730
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002685
(v2.0)
Arhgap42NM_02782371544
0.99711613.124324.200710.30325.237982.237043.1132622.7966.917071.43337
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002789
(v1.0)
Arhgap4271544
Minor ZGA0.94485
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002685
(v2.0)
Arhgap4271544
686/4100.2293476/4100.098943/4100.3389288/4100.8179155/4100.6491847/4100.4465
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002685
(v2.0)
Arhgap4271544
366/1820.4928240/1820.281535/1821.1701229/1821.6492128/1821.5286658/1821.2502
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002685
(v2.0)
Arhgap4271544
53.998511746.15
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002685
(v2.0)
Arhgap4271544
16.0597621.13
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002789
(v1.0)
Arhgap42NM_02782371544
13.640316.70187.674273.636472.19477
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002789
(v1.0)
Arhgap42NM_02782371544
572.419630.591380.173126.3788.8964
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002789
(v1.0)
Arhgap42NM_02782371544
14.26220.36465618.2221
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002789
(v1.0)
Arhgap42NM_02782371544
13.921316.534116.8651
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002789
(v1.0)
Arhgap42NM_02782371544
1548.61963.715
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002789
(v1.0)
Arhgap42NM_02782371544
14.27050.35966118.497
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002789
(v1.0)
Arhgap42NM_02782371544
7.105183.511164.79565
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002789
(v1.0)
Arhgap42NM_02782371544
18.388735.5944
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002789
(v1.0)
Arhgap42NM_02782371544
7.842213.7481
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002789
(v1.0)
Arhgap42NM_02782371544
7.185938.6514
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002789
(v1.0)
1453638_atMm.334955Arhgap42NM_027823.171544
196.975255.40338.750
0002789
(v1.0)
1457682_atMm.334955Arhgap42NM_027823.171544
0000485
Agilent44K N/A
Proteome N/A