DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002801
GeneArhgef11
Synonyms
Desc.Rho guanine nucleotide exchange factor (GEF) 11
LocusNM_001003912 chr3:87422673-87541955(+)
DB links


Entrez 213498
MGI 2441869
Ensembl ENSMUSG00000041977
Vega OTTMUSG00000031939
Featureprotein-coding
GO(BP)
  •   3 Terms
      G-protein coupled receptor signaling pathway (GO:0007186)
      Rho protein signal transduction (GO:0007266)
      positive regulation of transcription, DNA-dependent (GO:0045893)
GO(MF)
  •   1 Terms
GO(CC)
KEGG
  •   1 Terms
      Vascular smooth muscle contraction (mmu04270)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002697
(v2.0)
Arhgef11NM_001003912213498
8.79627.677644.485313.87387.234034.278468.1065153.96516.919393.88994
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002801
(v1.0)
Arhgef11213498
Minor ZGA0.99606
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002697
(v2.0)
Arhgef11213498
601/441-0.0661434/441-0.13970/4410.927315/4410.842298/441-0.111637/441-0.0687
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002697
(v2.0)
Arhgef11213498
290/2000.0231192/200-0.174269/2002.0015270/2001.751535/200-0.4459181/200-0.7385
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002697
(v2.0)
Arhgef11213498
61.870212947.96
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002697
(v2.0)
Arhgef11213498
21.97878226.8
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002801
(v1.0)
Arhgef11NM_001003912213498
28.776530.78110.3285.00025.69954
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002801
(v1.0)
Arhgef11NM_001003912213498
2432.932569.26738.075388.495332.934
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002801
(v1.0)
Arhgef11NM_001003912213498
30.08843.2167933.5827
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002801
(v1.0)
Arhgef11NM_001003912213498
29.369330.471939.9411
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002801
(v1.0)
Arhgef11NM_001003912213498
2769.352290.96
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002801
(v1.0)
Arhgef11NM_001003912213498
30.10593.1727343.8061
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002801
(v1.0)
Arhgef11NM_001003912213498
9.562114.82794.7928
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002801
(v1.0)
Arhgef11NM_001003912213498
724.697834.428
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002801
(v1.0)
Arhgef11NM_001003912213498
10.49662.90891
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002801
(v1.0)
Arhgef11NM_001003912213498
0.1163860.0600522
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002801
(v1.0)
1434926_atMm.287267Arhgef11NM_001003912.1213498
917.3548.85531.8250516.875
0002801
(v1.0)
1443539_atMm.287267Arhgef11NM_001003912.1213498
331.65295.575289.25309.175234.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002801
(v1.0)
A_52_P323525Arhgef11NM_001003912213498
11P1.4890.174P
Proteome N/A