DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002802
GeneArhgef12
SynonymsLARG
Desc.Rho guanine nucleotide exchange factor (GEF) 12
LocusNM_027144 chr9:42771925-42913801(-)
DB links


Entrez 69632
MGI 1916882
Ensembl ENSMUSG00000059495
Featureprotein-coding
GO(BP)
  •   4 Terms
      G-protein coupled receptor signaling pathway (GO:0007186)
      regulation of Rho protein signal transduction (GO:0035023)
      intracellular signal transduction (GO:0035556)
      termination of G-protein coupled receptor signaling pathway (GO:0038032)
GO(MF)
GO(CC)
KEGG
  •   3 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002698
(v2.0)
Arhgef12NM_02714469632
9.7115324.511756.354138.310421.09495.4962212.748960.767921.37064.25709
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002802
(v1.0)
Arhgef1269632
Minor ZGA0.96074
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002698
(v2.0)
Arhgef1269632
684/4100.225472/4100.0868131/4101.9239364/4101.1547162/4100.7125958/4100.6238
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002698
(v2.0)
Arhgef1269632
377/1920.4586205/192-0.0216123/1922.8819319/1922.049551/1920.1423353/1920.2779
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002698
(v2.0)
Arhgef1269632
53.498116033.44
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002698
(v2.0)
Arhgef1269632
11.600211510.09
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002802
(v1.0)
Arhgef12NM_02714469632
25.479939.105328.514114.60018.87391
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002802
(v1.0)
Arhgef12NM_02714469632
817.7331680.262555.2981.108145.526
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002802
(v1.0)
Arhgef12NM_02714469632
26.64163.551642.6648
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002802
(v1.0)
Arhgef12NM_02714469632
26.004838.712744.8903
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002802
(v1.0)
Arhgef12NM_02714469632
1340.71420.69
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002802
(v1.0)
Arhgef12NM_02714469632
26.65713.5029649.2342
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002802
(v1.0)
Arhgef12NM_02714469632
26.399614.09714.8082
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002802
(v1.0)
Arhgef12NM_02714469632
370.649351.521
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002802
(v1.0)
Arhgef12NM_02714469632
26.026220.6493
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002802
(v1.0)
Arhgef12NM_02714469632
1.059171.7814
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002802
(v1.0)
9513H3082F02-3Mm.1016592310014B11Rik69632
U030755NAP031905-12310014B11Rik;TC910798Q9D7D6U,F,23.34193.24133.21963.23623.51523.29753.396
0002802
(v1.0)
14461J0523E05-32310014B11Rik69632
U030755NAP121768-0012310014B11Rik;Q9D7D6U,F,22.95732.92992.88652.83493.33112.98443.2475
0002802
(v1.0)
14757J0807F06-3Mm.1016592310014B11Rik69632
U041475NAP038630-1TC904162U,F,23.47923.36443.61943.52714.03643.7253.9476
0002802
(v1.0)
19096L0246G01-3Mm.1016592310014B11Rik69632
U040399NAP123957-1Larg;TC904166,TC904155Q9D7D6U,F,22.43812.58942.95493.15842.40552.43772.3082
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002802
(v1.0)
1451159_atMm.275266Arhgef12NM_027144.269632
256.75237.7306.5203.825155.2
0002802
(v1.0)
1446965_atMm.275266Arhgef12NM_027144.269632
207.075202.4281.15483.725608.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002802
(v1.0)
A_52_P390227Arhgef12NM_02714469632
11P0.7190.207P
0002802
(v1.0)
A_52_P559808Arhgef12NM_02714469632
11P0.4040.0879P
Proteome N/A