DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002823
GeneArid1b
Synonyms
Desc.AT rich interactive domain 1B (SWI-like)
LocusNM_001085355 chr17:4995074-5347656(+)
DB links


Entrez 239985
MGI 1926129
Ensembl ENSMUSG00000069729
Vega OTTMUSG00000023805
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002720
(v2.0)
Arid1bNM_001085355239985
7.8823227.140927.72154.780764.372461.940863.1208543.62696.41461.82859
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002823
(v1.0)
Arid1b239985
Maternal RNA0.97705
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002720
(v2.0)
Arid1b239985
891/3061.0267540/3060.7014196/3062.9096759/3062.6319173/3061.2238957/3061.0432
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002720
(v2.0)
Arid1b239985
555/952.0223286/951.4642168/954.2587558/953.850467/951.5135569/951.9718
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002720
(v2.0)
Arid1b239985
64.241918035.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002720
(v2.0)
Arid1b239985
9.48371118.54
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002823
(v1.0)
Arid1bNM_001085355239985
28.21919.27573.562973.042062.13729
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002823
(v1.0)
Arid1bFR096616,NM_001085355239985
251.044163.71519.227214.968713.75
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002823
(v1.0)
Arid1bNM_001085355239985
29.50562.8826421.0302
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002823
(v1.0)
Arid1bNM_001085355239985
28.800419.082132.3041
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002823
(v1.0)
Arid1bFR096616,NM_001085355239985
187.593299.578
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002823
(v1.0)
Arid1bNM_001085355239985
29.52272.8431635.4301
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002823
(v1.0)
Arid1bNM_001085355239985
3.298752.937234.46732
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002823
(v1.0)
Arid1bFR096616,NM_001085355239985
19.014732.4128
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002823
(v1.0)
Arid1bNM_001085355239985
20.73633.67488
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002823
(v1.0)
Arid1bNM_001085355239985
1.553212.4771
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002823
(v1.0)
1455979_atMm.133401Arid1bNM_001085355.1239985
439.125619.75459.75325.425195.15
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002823
(v1.0)
A_51_P445555Arid1bAK033272239985
11P0.6730.157P
0002823
(v1.0)
A_52_P289256Arid1bAK129314239985
11P0.5980.122P
Proteome N/A