DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002824
GeneArid2
Synonymszipzap/p200
Desc.AT rich interactive domain 2 (ARID, RFX-like)
LocusNM_175251 chr15:96117953-96235894(+)
DB links


Entrez 77044
MGI 1924294
Ensembl ENSMUSG00000033237
Vega OTTMUSG00000017290
Featureprotein-coding
GO(BP)
  •   2 Terms
      nucleosome disassembly (GO:0006337)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
  •   1 Terms
GO(CC)
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002721
(v2.0)
Arid2NM_17525177044
6.0342220.19827.462818.422717.72297.003669.5476732.00919.41185.73976
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002824
(v1.0)
Arid277044
1-Cell Transient0.98416
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002721
(v2.0)
Arid277044
794/3130.8281515/3130.6006271/3133.3436649/3132.3741/313-5.2513127/313-1.8882
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002721
(v2.0)
Arid277044
407/1291.1387203/1290.5344198/1294.0968439/1293.07350/129-4.999369/129-1.4819
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002721
(v2.0)
Arid277044
40.825116724.45
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002721
(v2.0)
Arid277044
13.852110113.71
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002824
(v1.0)
Arid2NM_17525177044
20.997418.956713.703912.29526.60946
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002824
(v1.0)
Arid2FR285970,FR397632,NM_17525177044
109.883135.90298.959689.212360.3259
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002824
(v1.0)
Arid2NM_17525177044
21.95472.2067820.6822
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002824
(v1.0)
Arid2NM_17525177044
21.4318.766323.6275
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002824
(v1.0)
Arid2FR285970,FR397632,NM_17525177044
178.679266.157
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002824
(v1.0)
Arid2NM_17525177044
21.96752.1765525.9138
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002824
(v1.0)
Arid2NM_17525177044
12.687711.871513.4217
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002824
(v1.0)
Arid2FR285970,FR397632,NM_17525177044
86.3552144.925
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002824
(v1.0)
Arid2NM_17525177044
21.541116.0811
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002824
(v1.0)
Arid2NM_17525177044
14.53122.7192
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002824
(v1.0)
6030H3015B02-3Mm.171664432409D24Rik77044
U016607NAP092213-001TC804933,TC804932,TC804931Q9D982U,F4.11144.0123.36863.47823.12243.36683.2963
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002824
(v1.0)
1426525_atMm.17166Arid2NM_175251.377044
668.451076.85596.575348.35289.55
0002824
(v1.0)
1454990_atMm.17166Arid2NM_175251.377044
1016.41507.8751075.81325.551051.5
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002824
(v1.0)
A_51_P399545Arid2NM_17525177044
11P1.110.486P
0002824
(v1.0)
A_52_P25008Arid2AK04386477044
11P0.6290.136P
Proteome N/A