DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002828
GeneArid4a
SynonymsRbbp1
Desc.AT rich interactive domain 4A (RBP1-like)
LocusNM_001081195 chr12:72116954-72200338(+)
DB links


Entrez 238247
MGI 2444354
Ensembl ENSMUSG00000048118
Vega OTTMUSG00000017260
Featureprotein-coding
GO(BP)
  •   6 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002725
(v2.0)
Arid4aNM_001081195238247
3.987825.768756.5257310.2175.294733.012671.78216.128114.609434.18075
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002828
(v1.0)
Arid4a238247
2-Cell Transient0.9411
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002725
(v2.0)
Arid4a238247
759/3630.5501509/3630.3706195/3632.6645532/3631.87559/363-3.1406100/363-2.4416
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002725
(v2.0)
Arid4a238247
454/1590.9963230/1590.4141183/1593.7056480/1592.90563/159-3.292454/159-2.1265
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002725
(v2.0)
Arid4a238247
42.129516226.01
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002725
(v2.0)
Arid4a238247
9.29031257.43
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002828
(v1.0)
Arid4aNM_001081195238247
5.99394.508867.607473.668131.23562
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002828
(v1.0)
Arid4aNM_001081195238247
24.69887.8002446.33674.396719.25146
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002828
(v1.0)
Arid4aNM_001081195238247
6.267181.458394.91926
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002828
(v1.0)
Arid4aNM_001081195238247
6.117384.463584.52948
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002828
(v1.0)
Arid4aNM_001081195238247
5.3426415.0124
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002828
(v1.0)
Arid4aNM_001081195238247
6.270821.438414.96778
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002828
(v1.0)
Arid4aNM_001081195238247
7.043333.541733.18141
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002828
(v1.0)
Arid4aNM_001081195238247
4.349234.1305
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002828
(v1.0)
Arid4aNM_001081195238247
38.0874.71231
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002828
(v1.0)
Arid4aNM_001081195238247
4.617848.44593
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002828
(v1.0)
1436191_atMm.241601Arid4aNM_001081195.1238247
241.025143.35454.825127.07575.425
0002828
(v1.0)
1456420_atMm.241601Arid4aNM_001081195.1238247
141.175332.025170.6500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002828
(v1.0)
A_51_P156927Arid4aXM_354675238247
11P0.02680.021P
0002828
(v1.0)
A_51_P274274Arid4aAK087354238247
11P0.4560.0825P
0002828
(v1.0)
A_52_P462171Arid4aXM_354675238247
11P0.2410.0449P
Proteome N/A