DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002847
GeneArl4a
SynonymsArl4
Desc.ADP-ribosylation factor-like 4A
LocusNM_007487 chr12:40759878-40763963(-)
NM_001039515 chr12:40759878-40764574(-)
DB links


Entrez 11861
MGI 99437
Ensembl ENSMUSG00000047446
Vega OTTMUSG00000032944
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002744
(v2.0)
Arl4aNM_001039515,NM_00748711861
39.823419.232722.499123.72848.5264815.5851.6742218.292111.727120.9615
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002847
(v1.0)
Arl4a11861
Major ZGA0.96436
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002744
(v2.0)
Arl4a11861
695/3660.4114588/3660.5665684/3664.45832426/3664.050765/366-0.4298331/366-0.7417
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002744
(v2.0)
Arl4a11861
392/1470.8977281/1470.8143615/1475.55381821/1474.938417/147-1.012393/147-1.2463
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002744
(v2.0)
Arl4a11861
42.580110042.58
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002744
(v2.0)
Arl4a11861
15.56827121.93
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002847
(v1.0)
Arl4aNM_001039515,NM_00748711861
19.982615.563317.66815.92961.16346
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002847
(v1.0)
Arl4aFR374682,NM_001039515,NM_00748711861
23.745916.711119.45976.643991.35121
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002847
(v1.0)
Arl4aNM_001039515,NM_00748711861
20.893714.563816.9799
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002847
(v1.0)
Arl4aNM_001039515,NM_00748711861
20.394315.407113.5339
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002847
(v1.0)
Arl4aFR374682,NM_001039515,NM_00748711861
16.970115.0325
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002847
(v1.0)
Arl4aNM_001039515,NM_00748711861
20.905814.364314.8436
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002847
(v1.0)
Arl4aNM_001039515,NM_00748711861
16.35795.725278.11249
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002847
(v1.0)
Arl4aFR374682,NM_001039515,NM_00748711861
6.572029.33892
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002847
(v1.0)
Arl4aNM_001039515,NM_00748711861
25.014627.3691
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002847
(v1.0)
Arl4aNM_001039515,NM_00748711861
4.708325.41073
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002847
(v1.0)
14508J0546C05-3Mm.12723Arl411861
U033910NAP095852-001Arl4;TC837108P41275U,F,23.24963.23533.35023.66672.95163.09333.0822
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002847
(v1.0)
1431429_a_atMm.12723Arl4aNM_001039515.1,NM_007487.311861
337.1225.825300.9589.47550.425
0002847
(v1.0)
1435092_atMm.12723Arl4aNM_001039515.1,NM_007487.311861
198.575336.375169.4500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002847
(v1.0)
A_51_P379976Arl4NM_00748711861
11P0.6330.138P
0002847
(v1.0)
A_52_P155849Arl4NM_00748711861
11P0.4850.173P
0002847
(v1.0)
A_52_P86704Arl4NM_00748711861
11P1.1290.474P
Proteome N/A