DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002879
GeneArnt
SynonymsbHLHe2
D3Ertd557e
ESTM42
Hif1b
Desc.aryl hydrocarbon receptor nuclear translocator
LocusNM_009709 chr3:95238312-95301161(+)
NM_001037737 chr3:95238312-95301161(+)
DB links


Entrez 11863
MGI 88071
Ensembl ENSMUSG00000015522
Vega OTTMUSG00000016472
Featureprotein-coding
GO(BP)
  •   15 Terms
      response to hypoxia (GO:0001666)
      embryonic placenta development (GO:0001892)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      signal transduction (GO:0007165)
      response to toxin (GO:0009636)
      positive regulation vascular endothelial growth factor production (GO:0010575)
      cell differentiation (GO:0030154)
      intracellular receptor mediated signaling pathway (GO:0030522)
      positive regulation of protein sumoylation (GO:0033235)
      regulation of transcription from RNA polymerase II promoter in response to oxidative stress (GO:0043619)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of hormone biosynthetic process (GO:0046886)
      regulation of RNA biosynthetic process (GO:2001141)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002775
(v2.0)
ArntNM_001037737,NM_00970911863
8.4700224.314140.661124.752916.57119.949612.203741.323914.777918.4178
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002879
(v1.0)
Arnt11863
Minor ZGA0.99555
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002775
(v2.0)
Arnt11863
570/3320.2662390/3320.1158109/3321.9556310/3321.226181/3320.0223372/332-0.4337
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002775
(v2.0)
Arnt11863
295/1560.4041182/1560.1055104/1562.9218292/1562.217610/156-1.8062102/156-1.2003
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002775
(v2.0)
Arnt11863
42.95698948.27
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002775
(v2.0)
Arnt11863
15.18375826.18
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002879
(v1.0)
ArntNM_001037737,NM_00970911863
25.276428.112518.399111.46978.51051
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002879
(v1.0)
ArntFR374861,NM_001037737,NM_00970911863
179.149177.267170.04881.504665.0907
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002879
(v1.0)
ArntNM_001037737,NM_00970911863
26.42883.0975830.6714
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002879
(v1.0)
ArntNM_001037737,NM_00970911863
25.797127.830330.6276
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002879
(v1.0)
ArntFR374861,NM_001037737,NM_00970911863
551.79687.785
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002879
(v1.0)
ArntNM_001037737,NM_00970911863
26.44413.0551533.5914
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002879
(v1.0)
ArntNM_001037737,NM_00970911863
17.034711.074510.2893
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002879
(v1.0)
ArntFR374861,NM_001037737,NM_00970911863
193.349212.87
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002879
(v1.0)
ArntNM_001037737,NM_00970911863
12.071211.6717
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002879
(v1.0)
ArntNM_001037737,NM_00970911863
4.166092.70009
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002879
(v1.0)
10161H3091H09-3Mm.4316Arnt11863
U003569NAP107202-1Arnt;TC887829P53762U,F,22.77862.85412.98782.94043.1352.93833.0769
0002879
(v1.0)
14160J0419D03-3Mm.206804Arnt11863
U003569NAP001806-001Arnt;TC887828P53762U,F,23.33563.38252.81912.8312.61282.67082.6909
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002879
(v1.0)
1421721_a_atMm.250265ArntNM_001037737.2,NM_009709.411863
69.97598.892.17557.6536.075
0002879
(v1.0)
1437042_atMm.250265ArntNM_001037737.2,NM_009709.411863
292.75164.15130.1116.575247.2
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002879
(v1.0)
A_51_P494196ArntNM_00970911863
11P0.8210.466P
0002879
(v1.0)
A_52_P324866ArntAK22045811863
11P1.5690.144P
0002879
(v1.0)
A_52_P577150ArntNM_00970911863
11P1.1330.435P
Proteome N/A