DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002881
GeneArntl
SynonymsArnt3
bHLHe5
Bmal1
MOP3
Desc.aryl hydrocarbon receptor nuclear translocator-like
LocusNM_007489 chr7:120350979-120457640(+)
NM_001243048 chr7:120350979-120457640(+)
DB links


Entrez 11865
MGI 1096381
Ensembl ENSMUSG00000055116
Featureprotein-coding
GO(BP)
GO(MF)
  •   13 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity (GO:0000982)
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (GO:0001077)
      RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription (GO:0001190)
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      signal transducer activity (GO:0004871)
      protein binding (GO:0005515)
      transcription factor binding (GO:0008134)
      aryl hydrocarbon receptor binding (GO:0017162)
      bHLH transcription factor binding (GO:0043425)
      protein heterodimerization activity (GO:0046982)
      protein dimerization activity (GO:0046983)
      Hsp90 protein binding (GO:0051879)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002777
(v2.0)
ArntlNM_001243048,NM_00748911865
1.9011361.0521139.24623.97715.971433.950684.02355119.8889.209524.128
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002881
(v1.0)
Arntl11865
Minor ZGA0.99434
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002777
(v2.0)
Arntl11865
744/4600.1805461/460-0.1128125/4601.6953321/4600.8088197/4600.82871082/4600.6335
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002777
(v2.0)
Arntl11865
372/1580.719196/1580.1936106/1582.932244/1581.941353/1580.4714280/1580.2248
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002777
(v2.0)
Arntl11865
59.612615937.49
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002777
(v2.0)
Arntl11865
10.11511059.63
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002881
(v1.0)
ArntlNM_00748911865
61.598495.279517.3164.118572.69761
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002881
(v1.0)
ArntlNM_00748911865
680.2391349.26432.23813.660112.6854
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002881
(v1.0)
ArntlNM_00748911865
64.40670.648113103.952
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002881
(v1.0)
ArntlNM_00748911865
62.867494.322888.0163
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002881
(v1.0)
ArntlNM_00748911865
1396.572244.27
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002881
(v1.0)
ArntlNM_00748911865
64.44420.63923696.5333
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002881
(v1.0)
ArntlNM_00748911865
16.03193.976645.85996
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002881
(v1.0)
ArntlNM_00748911865
8.0787912.4356
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002881
(v1.0)
ArntlNM_00748911865
25.69434.29028
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002881
(v1.0)
ArntlNM_00748911865
83.439773.8473
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002881
(v1.0)
10938H3105G09-3Mm.12177Arntl11865
U008650NAP007301-001Arntl;TC871038,TC843036,TC843035,TC843032O88295U,F,24.02334.093.17882.94322.2362.40872.4576
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002881
(v1.0)
1425099_a_atMm.440371ArntlNM_007489.311865
514.5751060.8351.95084.575
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002881
(v1.0)
A_52_P267651ArntlNM_00748911865
11P0.6640.158P
Proteome N/A