DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002883
GeneArpc1a
SynonymsSid32
Desc.actin related protein 2/3 complex, subunit 1A
LocusNM_019767 chr5:145844738-145869625(+)
DB links


Entrez 56443
MGI 1928896
Ensembl ENSMUSG00000029621
Vega OTTMUSG00000022945
Featureprotein-coding
GO(BP)
  •   1 Terms
      regulation of actin filament polymerization (GO:0030833)
GO(MF)
GO(CC)
KEGG
  •   3 Terms
      Fc gamma R-mediated phagocytosis (mmu04666)
      Regulation of actin cytoskeleton (mmu04810)
      Bacterial invasion of epithelial cells (mmu05100)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002779
(v2.0)
Arpc1aNM_01976756443
75.59148.703114.4330955.649934.680917.61749.30966.5779838.145317.9107
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002883
(v1.0)
Arpc1a56443
2-Cell Transient0.96689
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002779
(v2.0)
Arpc1a56443
651/4150.1364472/4150.0693224/4152.6763542/4151.7104114/4150.1919834/4150.4067
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002779
(v2.0)
Arpc1a56443
327/1860.2997191/186-0.0775211/1863.6987504/1862.752924/186-0.8695214/186-0.3946
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002779
(v2.0)
Arpc1a56443
81.367112664.58
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002779
(v2.0)
Arpc1a56443
29.50847240.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002883
(v1.0)
Arpc1aNM_01976756443
9.046723.0847241.421224.125534.9235
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002883
(v1.0)
Arpc1aNM_01976756443
12.33234.2044654.508330.416245.6624
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002883
(v1.0)
Arpc1aNM_01976756443
9.4591827.64463.3655
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002883
(v1.0)
Arpc1aNM_01976756443
9.23313.053754.86803
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002883
(v1.0)
Arpc1aNM_01976756443
21.797411.6206
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002883
(v1.0)
Arpc1aNM_01976756443
9.4646827.26595.33909
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002883
(v1.0)
Arpc1aNM_01976756443
38.349623.294226.3938
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002883
(v1.0)
Arpc1aNM_01976756443
98.9383130.597
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002883
(v1.0)
Arpc1aNM_01976756443
2.9528721.2137
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002883
(v1.0)
Arpc1aNM_01976756443
0.3022520.0389884
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002883
(v1.0)
12497H3144F10-5Mm.34695Arpc1a56443
U032177NAP014648-001TC8580112.00142.15772.26912.43692.15072.29932.2257
0002883
(v1.0)
18776L0227A03-3Mm.34695Arpc1a56443
U006426NAP090086-1Arpc1a;TC858019,TC858014,TC858012,TC858010Q9R0Q6U,F,22.58262.47233.16233.24882.5822.93262.9117
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002883
(v1.0)
1416079_a_atMm.371610Arpc1aNM_019767.256443
00260.425147.625231.65
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002883
(v1.0)
Arpc1a56443
020020