DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002886
GeneArpc3
SynonymsArp2/3 complex subunit p21-Arc
p21-Ar
Desc.actin related protein 2/3 complex, subunit 3
LocusNM_019824 chr5:122841937-122856187(+)
DB links


Entrez 56378
MGI 1928375
Ensembl ENSMUSG00000029465
Vega OTTMUSG00000016282
Featureprotein-coding
GO(BP)
  •   1 Terms
      regulation of actin filament polymerization (GO:0030833)
GO(MF)
GO(CC)
KEGG
  •   3 Terms
      Fc gamma R-mediated phagocytosis (mmu04666)
      Regulation of actin cytoskeleton (mmu04810)
      Bacterial invasion of epithelial cells (mmu05100)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002782
(v2.0)
Arpc3NM_01982456378
215.111206.34208.094103.197124.97943.223120.501245.05117.55542.6298
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002886
(v1.0)
Arpc356378
Maternal RNA0.99037
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002782
(v2.0)
Arpc356378
427/2690.1533209/269-0.4782115/2692.3239279/2691.375711/269-2.4509118/269-1.7751
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002782
(v2.0)
Arpc356378
279/1650.2436132/165-0.435109/1652.9137265/1651.99848/165-2.174692/165-1.4273
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002782
(v2.0)
Arpc356378
54.340812244.54
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002782
(v2.0)
Arpc356378
20.10128224.51
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002886
(v1.0)
Arpc3NM_01982456378
214.425144.07776.820186.582385.6116
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002886
(v1.0)
Arpc3NM_01982456378
284.815176.52393.6581111.085108.08
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002886
(v1.0)
Arpc3NM_01982456378
224.20178.6682157.191
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002886
(v1.0)
Arpc3NM_01982456378
218.843142.63181.673
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002886
(v1.0)
Arpc3NM_01982456378
179.249220.159
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002886
(v1.0)
Arpc3NM_01982456378
224.33277.5907199.253
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002886
(v1.0)
Arpc3NM_01982456378
71.123483.598781.2591
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002886
(v1.0)
Arpc3NM_01982456378
109.885105.222
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002886
(v1.0)
Arpc3NM_01982456378
64.43536.89289
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002886
(v1.0)
Arpc3NM_01982456378
14.91983.5144
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002886
(v1.0)
11383H3114D08-3Arpc356378
U006139NAP007815-001Arpc3;TC930210Q9JM76U,F,23.0053.16153.06692.93023.06232.91513.1334
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002886
(v1.0)
1448279_atMm.275942Arpc3NM_019824.356378
1677.0251074.4651.525724.7751199.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002886
(v1.0)
A_51_P129767Arpc3NM_01982456378
11P0.7230.19P
0002886
(v1.0)
A_52_P686784Arpc3NM_01982456378
11P0.5940.137P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002886
(v1.0)
Arpc356378
242474