DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002889
GeneArpc5l
SynonymsARC16-2
Desc.actin related protein 2/3 complex, subunit 5-like
LocusNM_028809 chr2:38863659-38871392(+)
DB links


Entrez 74192
MGI 1921442
Ensembl ENSMUSG00000026755
Vega OTTMUSG00000012418
Featureprotein-coding
GO(BP)
  •   1 Terms
      regulation of actin filament polymerization (GO:0030833)
GO(MF)
GO(CC)
KEGG
  •   3 Terms
      Fc gamma R-mediated phagocytosis (mmu04666)
      Regulation of actin cytoskeleton (mmu04810)
      Bacterial invasion of epithelial cells (mmu05100)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002785
(v2.0)
Arpc5lNM_02880974192
46.3025168.34200.24977.022257.86239.923520.2309171.30950.025844.8845
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002889
(v1.0)
Arpc5l74192
Maternal RNA0.97349
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002785
(v2.0)
Arpc5l74192
719/531-0.0754413/531-0.4777307/5312.7827813/5311.94086/531-4.198780/531-3.3056
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002785
(v2.0)
Arpc5l74192
314/1920.1959172/192-0.2733171/1923.354472/1922.61321/192-4.558138/192-2.8875
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002785
(v2.0)
Arpc5l74192
44.078421220.79
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002785
(v2.0)
Arpc5l74192
9.3951178.03
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002889
(v1.0)
Arpc5lNM_02880974192
174.951138.52757.349240.060914.4368
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002889
(v1.0)
Arpc5lNM_02880974192
211.038150.64464.726846.880716.7567
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002889
(v1.0)
Arpc5lNM_02880974192
182.92716.9333151.136
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002889
(v1.0)
Arpc5lNM_02880974192
178.555137.136126.728
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002889
(v1.0)
Arpc5lNM_02880974192
152.978144.774
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002889
(v1.0)
Arpc5lNM_02880974192
183.03316.7014138.991
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002889
(v1.0)
Arpc5lNM_02880974192
53.096438.680434.5245
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002889
(v1.0)
Arpc5lNM_02880974192
46.37541.1705
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002889
(v1.0)
Arpc5lNM_02880974192
63.72533.7419
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002889
(v1.0)
Arpc5lNM_02880974192
138.05197.5694
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002889
(v1.0)
19200L0256F07-3Mm.276652010015J01Rik74192
2010015J01Rik3.7773.97554.02893.97573.563.80073.5752
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002889
(v1.0)
1452044_atMm.38155Arpc5lNM_028809.174192
2623.5251662.3751024.375552.425613.7
0002889
(v1.0)
1436421_s_atMm.38155Arpc5lNM_028809.174192
1455.4753227.6898.075165.3488.4
0002889
(v1.0)
1441190_atMm.38155Arpc5lNM_028809.174192
00386.200
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002889
(v1.0)
A_51_P180108Arpc5lNM_02880974192
11P0.6310.137P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002889
(v1.0)
Arpc5l74192
142153