DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002896
GeneArrdc1
Synonyms
Desc.arrestin domain containing 1
LocusNM_001162485 chr2:24780872-24790801(-)
NM_178408 chr2:24780872-24790801(-)
NR_027876 chr2:24780875-24790801(-)
DB links


Entrez 215705
MGI 2446136
Ensembl ENSMUSG00000026972
Vega OTTMUSG00000012297
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002791
(v2.0)
Arrdc1NM_001162485,NM_178408,NR_027876215705
14.636223.464103.0553.064144.846711.73547.67992136.40551.09712.0337
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002896
(v1.0)
Arrdc1215705
Maternal RNA0.98401
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002791
(v2.0)
Arrdc1215705
647/4240.0967379/424-0.2773119/4241.7393364/4241.1066155/4240.6012889/4240.4678
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002791
(v2.0)
Arrdc1215705
371/1980.3914191/198-0.1672112/1982.7061350/1982.13993/1980.953559/1980.8946
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002791
(v2.0)
Arrdc1215705
61.052614641.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002791
(v2.0)
Arrdc1215705
18.949610118.76
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002896
(v1.0)
Arrdc1NM_001162485,NM_178408215705
232.02971.219539.21830.84995.30536
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002896
(v1.0)
Arrdc1NM_001162485,NM_178408,NR_027876215705
871.978227.871112.872118.66819.9542
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002896
(v1.0)
Arrdc1NM_001162485,NM_178408215705
242.6085.3524877.702
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002896
(v1.0)
Arrdc1NM_001162485,NM_178408215705
236.80970.5044100.983
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002896
(v1.0)
Arrdc1NM_001162485,NM_178408,NR_027876215705
125.353182.573
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002896
(v1.0)
Arrdc1NM_001162485,NM_178408215705
242.7495.27917110.755
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002896
(v1.0)
Arrdc1NM_001162485,NM_178408215705
36.309829.786835.2337
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002896
(v1.0)
Arrdc1NM_001162485,NM_178408,NR_027876215705
46.110856.3586
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002896
(v1.0)
Arrdc1NM_001162485,NM_178408215705
35.877522.5763
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002896
(v1.0)
Arrdc1NM_001162485,NM_178408215705
53.100626.9641
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002896
(v1.0)
11415H3115A07-3LOC215705215705
U022370NAP008681-001TC842685,TC842681Q99KN1U,F3.76943.90294.2324.04273.81934.00023.8433
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002896
(v1.0)
1424578_atMm.45275Arrdc1NM_001162485.1,NM_178408.3215705
1042.975892.775606.35465.075264.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002896
(v1.0)
A_52_P188018Arrdc1NM_178408215705
11P1.0530.696P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0002896
(v1.0)
Arrdc1215705
1.33202.6720