DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002977
GeneAsxl1
Synonyms
Desc.additional sex combs like 1
LocusNM_001039939 chr2:153171875-153229743(+)
DB links


Entrez 228790
MGI 2684063
Ensembl ENSMUSG00000042548
Vega OTTMUSG00000019852
Featureprotein-coding
GO(BP)
  •   11 Terms
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      chromatin modification (GO:0016568)
      response to retinoic acid (GO:0032526)
      negative regulation of peroxisome proliferator activated receptor signaling pathway (GO:0035359)
      monoubiquitinated histone H2A deubiquitination (GO:0035522)
      negative regulation of fat cell differentiation (GO:0045599)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of retinoic acid receptor signaling pathway (GO:0048386)
      negative regulation of retinoic acid receptor signaling pathway (GO:0048387)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002879
(v2.0)
Asxl1NM_001039939228790
18.032380.920687.542520.779210.866215.86727.7550794.507810.761818.9165
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002977
(v1.0)
Asxl1228790
Maternal RNA0.98414
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002879
(v2.0)
Asxl1228790
743/3610.5273480/3610.2941209/3612.7718542/3611.910216/361-2.3671110/361-2.2981
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002879
(v2.0)
Asxl1228790
408/1480.9455221/1480.4596192/1483.8704461/1482.94933/148-3.191752/148-2.0766
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002879
(v2.0)
Asxl1228790
47.010514731.98
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002879
(v2.0)
Asxl1228790
15.418711113.89
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002977
(v1.0)
Asxl1NM_001039939228790
84.131360.624615.47187.528645.30146
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002977
(v1.0)
Asxl1NM_001039939228790
750.779453.501143.64571.822638.3559
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002977
(v1.0)
Asxl1NM_001039939228790
87.9676.5945966.1427
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002977
(v1.0)
Asxl1NM_001039939228790
85.864560.015869.8972
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002977
(v1.0)
Asxl1NM_001039939228790
197.155255.584
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002977
(v1.0)
Asxl1NM_001039939228790
88.01816.5042776.6609
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002977
(v1.0)
Asxl1NM_001039939228790
14.32457.26927.4635
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002977
(v1.0)
Asxl1NM_001039939228790
39.006831.0609
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002977
(v1.0)
Asxl1NM_001039939228790
43.62959.97233
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002977
(v1.0)
Asxl1NM_001039939228790
5.66253.65629
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002977
(v1.0)
1434561_atMm.330677Asxl1NM_001039939.1228790
679.7926.7332.87564.57592.325
0002977
(v1.0)
1435077_atMm.330677Asxl1NM_001039939.1228790
557.1407.725373.625133.12577.7
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002977
(v1.0)
A_51_P466858Asxl1AK079284228790
11P0.5550.148P
0002977
(v1.0)
A_52_P549405Asxl1AK122413228790
11P0.7160.186P
Proteome N/A