DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0002988

Gene

Ate1

Synonyms

Description

arginyltransferase 1

Locus

NM_001271343 UCSC: chr7:137535008-137663883(-) OLP: chr7:137535008-137663883(-)
NM_013799 UCSC: chr7:137535008-137663094(-) OLP: chr7:137535008-137663094(-)
NM_001136054 UCSC: chr7:137535008-137663094(-) OLP: chr7:137535008-137663094(-)
NM_001029895 UCSC: chr7:137535008-137663883(-) OLP: chr7:137535008-137663883(-)

DB links

Entrez 11907
MGI 1333870
Ensembl ENSMUSG00000030850

Feature

protein-coding

GO_BP

1 Terms

GO_MF

3 Terms

GO_CC

2 Terms

KEGG

see DBTMEE:2002892 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0002988 (v1.0)	Ate1	NM_001029895,NM_001136054,NM_013799	11907	7.76955	6.93716	7.64826	6.32344	2.76782

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0002988 (v1.0)	Ate1	NM_001029895,NM_001136054,NM_013799	11907	8.12377	3.6031	7.56859

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0002988 (v1.0)	Ate1	NM_001029895,NM_001136054,NM_013799	11907	7.92961	6.86751	4.4353

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0002988 (v1.0)	Ate1	NM_001029895,NM_001136054,NM_013799	11907	8.12849	3.55375	4.86449

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0002988 (v1.0)	Ate1	NM_001029895,NM_001136054,NM_013799	11907	7.0811	6.10553	9.19193

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0002988 (v1.0)	Ate1	NM_001029895,NM_001136054,NM_013799	11907	7.40196	4.30463

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0002988 (v1.0)	Ate1	NM_001029895,NM_001136054,NM_013799	11907	1.73841	3.08911

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0002988 (v1.0)	1279	C0192E03-3	Mm.216321	Ate1	11907	U029332	NAP032010-1	Ate1;	TC916249,TC805459	Q9Z2A5	U,F,2	2.3694	2.284	2.3916	2.3224	2.2194	2.2507	2.4341
0002988 (v1.0)	2465	C0326F09-3	Mm.216321	Ate1	11907	U029332	NAP105203-1	Ate1;	TC805459	Q9Z2A5	U,F,2	2.6241	2.6556	2.3949	2.6409	2.7695	2.6799	2.7721
0002988 (v1.0)	15831	K0300D04-3	Mm.216321	Ate1	11907	U029332	NAP104804-1	Ate1;	TC805461,TC805459	Q9Z2A5	U,F,2	3.0193	3.0744	2.6346	2.6162	2.3217	2.6246	2.7477
0002988 (v1.0)	17532	K0640A06-3	Mm.216321	Ate1	11907	U029332	NAP095378-001	Ate1;	TC916249,TC805459	Q9Z2A5	U,F,2	3.2827	3.2383	3.1895	3.1918	3.3805	3.2811	3.2817
0002988 (v1.0)	17829	L0021G12-3	Mm.216321	Ate1	11907	U029332	NAP104804-1	Ate1;	TC805459	Q9Z2A5	U,F,2	3.0114	2.7516	2.8365	2.8846	2.682	2.823	2.7721

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0002988 (v1.0)	1420651_at	Mm.216321	Ate1	NM_013799.2,NM_001136054.1,NM_001029895.2	11907	92.875	90.775	254.175	0	72.8
0002988 (v1.0)	1435173_at	Mm.216321	Ate1	NM_013799.2,NM_001136054.1,NM_001029895.2	11907	239.625	379.65	234.85	337.475	796.625
0002988 (v1.0)	1449709_s_at	Mm.216321	Ate1	NM_013799.2,NM_001136054.1,NM_001029895.2	11907	126.075	211.525	193.3	166.175	465.775

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0002988 (v1.0)	A_52_P639567	Ate1	NM_013799	11907	1	1	P	0.884	0.442	P

N/A