DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0002988
GeneAte1
Synonyms
Desc.arginyltransferase 1
LocusNM_001271343 chr7:137535008-137663883(-)
NM_013799 chr7:137535008-137663094(-)
NM_001136054 chr7:137535008-137663094(-)
NM_001029895 chr7:137535008-137663883(-)
DB links


Entrez 11907
MGI 1333870
Ensembl ENSMUSG00000030850
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002892
(v2.0)
Ate1NM_001029895,NM_001136054,NM_001271343,NM_01379911907
8.531383.052664.722924.780535.316036.502043.133773.210537.30027.40031
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0002988
(v1.0)
Ate111907
Minor ZGA0.94119
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002892
(v2.0)
Ate111907
679/4360.126511/4360.1125418/4363.50411197/4362.781233/436-1.6366278/436-1.2441
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002892
(v2.0)
Ate111907
352/1720.5178195/1720.0645293/1724.2761658/1723.248212/172-1.702584/172-1.6159
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002892
(v2.0)
Ate111907
64.869216639.08
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002892
(v2.0)
Ate111907
19.814611716.94
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002988
(v1.0)
Ate1NM_001029895,NM_001136054,NM_01379911907
7.769556.937167.648266.323442.76782
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0002988
(v1.0)
Ate1NM_001029895,NM_001136054,NM_01379911907
10.97648.824429.8033110.51714.20111
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0002988
(v1.0)
Ate1NM_001029895,NM_001136054,NM_01379911907
8.123773.60317.56859
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0002988
(v1.0)
Ate1NM_001029895,NM_001136054,NM_01379911907
7.929616.867514.4353
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0002988
(v1.0)
Ate1NM_001029895,NM_001136054,NM_01379911907
8.959886.16461
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0002988
(v1.0)
Ate1NM_001029895,NM_001136054,NM_01379911907
8.128493.553754.86449
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0002988
(v1.0)
Ate1NM_001029895,NM_001136054,NM_01379911907
7.08116.105539.19193
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0002988
(v1.0)
Ate1NM_001029895,NM_001136054,NM_01379911907
10.403516.6985
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0002988
(v1.0)
Ate1NM_001029895,NM_001136054,NM_01379911907
7.401964.30463
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0002988
(v1.0)
Ate1NM_001029895,NM_001136054,NM_01379911907
1.738413.08911
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0002988
(v1.0)
1279C0192E03-3Mm.216321Ate111907
U029332NAP032010-1Ate1;TC916249,TC805459Q9Z2A5U,F,22.36942.2842.39162.32242.21942.25072.4341
0002988
(v1.0)
2465C0326F09-3Mm.216321Ate111907
U029332NAP105203-1Ate1;TC805459Q9Z2A5U,F,22.62412.65562.39492.64092.76952.67992.7721
0002988
(v1.0)
15831K0300D04-3Mm.216321Ate111907
U029332NAP104804-1Ate1;TC805461,TC805459Q9Z2A5U,F,23.01933.07442.63462.61622.32172.62462.7477
0002988
(v1.0)
17532K0640A06-3Mm.216321Ate111907
U029332NAP095378-001Ate1;TC916249,TC805459Q9Z2A5U,F,23.28273.23833.18953.19183.38053.28113.2817
0002988
(v1.0)
17829L0021G12-3Mm.216321Ate111907
U029332NAP104804-1Ate1;TC805459Q9Z2A5U,F,23.01142.75162.83652.88462.6822.8232.7721
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0002988
(v1.0)
1420651_atMm.216321Ate1NM_013799.2,NM_001136054.1,NM_001029895.211907
92.87590.775254.175072.8
0002988
(v1.0)
1435173_atMm.216321Ate1NM_013799.2,NM_001136054.1,NM_001029895.211907
239.625379.65234.85337.475796.625
0002988
(v1.0)
1449709_s_atMm.216321Ate1NM_013799.2,NM_001136054.1,NM_001029895.211907
126.075211.525193.3166.175465.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0002988
(v1.0)
A_52_P639567Ate1NM_01379911907
11P0.8840.442P
Proteome N/A