DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003007
GeneAtg3
SynonymsAPG3
Apg3l
PC3-96
Desc.autophagy related 3
LocusNM_026402 chr16:45158942-45188651(+)
DB links


Entrez 67841
MGI 1915091
Ensembl ENSMUSG00000022663
Vega OTTMUSG00000025355
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002912
(v2.0)
Atg3NM_02640267841
21.816312.508116.744196.623370.52956.0000414.703112.352650.45137.45062
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003007
(v1.0)
Atg367841
2-Cell Transient0.95651
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002912
(v2.0)
Atg367841
802/4040.4754652/4040.5731961/4044.81013031/4044.230230/404-1.661153/404-1.9895
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002912
(v2.0)
Atg367841
466/1950.7411340/1950.6831825/1955.59662263/1954.850115/195-1.5874/195-1.9754
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002912
(v2.0)
Atg367841
43.56111637.55
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002912
(v2.0)
Atg367841
15.87818518.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003007
(v1.0)
Atg3NM_02640267841
12.999811.54671.930448.783610.3786
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003007
(v1.0)
Atg3FR337545,NM_02640267841
62.118246.0152343.891236.93242.9452
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003007
(v1.0)
Atg3NM_02640267841
13.59257.9784312.5969
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003007
(v1.0)
Atg3NM_02640267841
13.267711.43019.17333
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003007
(v1.0)
Atg3FR337545,NM_02640267841
105.49266.6888
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003007
(v1.0)
Atg3NM_02640267841
13.60047.8691610.061
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003007
(v1.0)
Atg3NM_02640267841
66.596347.102535.0358
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003007
(v1.0)
Atg3FR337545,NM_02640267841
235.522163.522
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003007
(v1.0)
Atg3NM_02640267841
12.613461.9246
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003007
(v1.0)
Atg3NM_02640267841
18.041831.448
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003007
(v1.0)
1448993_atMm.41775Atg3NM_026402.367841
427.275643.1251110.71088.15404.125
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003007
(v1.0)
A_52_P464003Atg3lNM_02640267841
11P0.6990.174P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003007
(v1.0)
Atg367841
101101