DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003014
GeneAtg9a
SynonymsApg9l1
Desc.autophagy related 9A
LocusNM_001003917 chr1:75177440-75188497(-)
DB links


Entrez 245860
MGI 2138446
Ensembl ENSMUSG00000033124
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002919
(v2.0)
Atg9aNM_001003917,NM_001288612,NM_001288613,NR_109938245860
182.88119.460714.974465.4332117.4773.352399.0307919.159880.07992.91296
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003014
(v1.0)
Atg9a245860
MGA0.99743
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002919
(v2.0)
Atg9a245860
707/543-0.1318398/543-0.5631142/5431.6442360/5430.735712/543-3.3376108/543-2.9118
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002919
(v2.0)
Atg9a245860
347/2400.019173/240-0.5855134/2402.6998330/2401.786/240-3.066657/240-2.6415
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002919
(v2.0)
Atg9a245860
88.356813366.43
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002919
(v2.0)
Atg9a245860
33.26087544.35
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003014
(v1.0)
Atg9aNM_001003917245860
20.342710.335448.284481.17336.40503
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003014
(v1.0)
Atg9aNM_001003917245860
50.616928.935126.673216.95719.5703
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003014
(v1.0)
Atg9aNM_001003917245860
21.270168.558911.2762
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003014
(v1.0)
Atg9aNM_001003917245860
20.761710.231614.365
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003014
(v1.0)
Atg9aNM_001003917245860
43.082867.3407
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003014
(v1.0)
Atg9aNM_001003917245860
21.282567.619915.755
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003014
(v1.0)
Atg9aNM_001003917245860
44.703878.376155.5698
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003014
(v1.0)
Atg9aNM_001003917245860
195.206139.04
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003014
(v1.0)
Atg9aNM_001003917245860
3.9305814.179
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003014
(v1.0)
Atg9aNM_001003917245860
0.411560.273026
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003014
(v1.0)
1435784_atMm.479951Atg9aNM_001003917.3245860
211.3233.8344.2785.775248.8
Agilent44K N/A
Proteome N/A