DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003019
GeneAtl2
SynonymsAip-2
Arl6ip2
Desc.atlastin GTPase 2
LocusNM_019717 chr17:80247732-80295368(-)
NM_178050 chr17:80247732-80295463(-)
DB links


Entrez 56298
MGI 1929492
Ensembl ENSMUSG00000059811
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002924
(v2.0)
Atl2NM_001286647,NM_019717,NM_17805056298
6.48195104.767127.05632.173820.459122.849820.482676.431422.87224.9342
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003019
(v1.0)
Atl256298
Maternal RNA0.9753
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002924
(v2.0)
Atl256298
711/4540.1341501/4540.0259250/4542.708468/4541.3702160/4540.549886/4540.3646
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002924
(v2.0)
Atl256298
398/1880.5667247/1880.2762241/1883.8751434/1882.522478/1880.7754407/1880.5127
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002924
(v2.0)
Atl256298
83.738918345.76
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002924
(v2.0)
Atl256298
13.381810612.62
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003019
(v1.0)
Atl2NM_019717,NM_17805056298
112.15690.306424.670314.502614.6654
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003019
(v1.0)
Atl2NM_019717,NM_17805056298
141.657102.91534.5226.036242.4899
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003019
(v1.0)
Atl2NM_019717,NM_17805056298
117.2692.3744898.5263
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003019
(v1.0)
Atl2NM_019717,NM_17805056298
114.46689.399758.254
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003019
(v1.0)
Atl2NM_019717,NM_17805056298
3252.721304.97
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003019
(v1.0)
Atl2NM_019717,NM_17805056298
117.3372.3419663.891
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003019
(v1.0)
Atl2NM_019717,NM_17805056298
22.840814.002816.3962
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003019
(v1.0)
Atl2NM_019717,NM_17805056298
182.091214.16
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003019
(v1.0)
Atl2NM_019717,NM_17805056298
72.129821.6921
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003019
(v1.0)
Atl2NM_019717,NM_17805056298
40.708972.4258
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003019
(v1.0)
5598H3003E12-3Mm.24719Arl6ip256298
U038078NAP003497-002ARL6IP2;Arl6ip2;GBP1;TC900182,TC848891,TC843603,TC843602Q9D873U,F,24.22454.17313.17892.99243.00593.09863.0725
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003019
(v1.0)
1416793_atMm.175403Atl2NM_019717.2,NM_178050.356298
1540.852883.925577.95470.5497.475
0003019
(v1.0)
1435594_atMm.175403Atl2NM_019717.2,NM_178050.356298
2825.7253593.05000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003019
(v1.0)
A_51_P163834Arl6ip2AK00838156298
11P0.9270.625P
0003019
(v1.0)
A_51_P316993Arl6ip2NM_01971756298
11P0.8690.403P
0003019
(v1.0)
A_52_P512901Arl6ip2NM_17805056298
11P1.040.763P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003019
(v1.0)
Atl256298
042052