DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003022
GeneAtmin
SynonymsAsciz
Desc.ATM interactor
LocusNM_177700 chr8:119467293-119484345(+)
DB links


Entrez 234776
MGI 2682328
Ensembl ENSMUSG00000047388
Vega OTTMUSG00000037784
Featureprotein-coding
GO(BP)
  •   4 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      response to DNA damage stimulus (GO:0006974)
      positive regulation of transcription, DNA-dependent (GO:0045893)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002927
(v2.0)
AtminNM_177700234776
28.3358115.082191.8774.843834.807119.02755.17162240.62236.376913.1426
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003022
(v1.0)
Atmin234776
Minor ZGA0.97506
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002927
(v2.0)
Atmin234776
745/5170.0142425/517-0.39891/5171.0771239/5170.217153/517-1.2129332/517-1.2346
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002927
(v2.0)
Atmin234776
397/2380.2245181/238-0.508673/2381.844191/2381.006325/238-1.1616162/238-1.1469
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002927
(v2.0)
Atmin234776
122.678415977.16
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002927
(v2.0)
Atmin234776
23.145244.5
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003022
(v1.0)
AtminNM_177700234776
119.631132.78955.716424.13473.64499
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003022
(v1.0)
AtminFR047568,NM_177700234776
144.53145.51262.927228.23524.27952
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003022
(v1.0)
AtminNM_177700234776
125.08510.3627144.876
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003022
(v1.0)
AtminNM_177700234776
122.096131.456178.18
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003022
(v1.0)
AtminFR047568,NM_177700234776
147.765201.002
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003022
(v1.0)
AtminNM_177700234776
125.15810.2207195.422
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003022
(v1.0)
AtminNM_177700234776
51.584723.30325.2226
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003022
(v1.0)
AtminFR047568,NM_177700234776
27.930130.1679
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003022
(v1.0)
AtminNM_177700234776
66.276350.1679
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003022
(v1.0)
AtminNM_177700234776
6.495386.46019
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003022
(v1.0)
1434143_atMm.259736AtminNM_177700.4234776
185.75114.725380.225067.975
0003022
(v1.0)
1434381_atMm.259736AtminNM_177700.4234776
787.45519.2872.750365.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003022
(v1.0)
A_52_P342773BC060631NM_177700234776
11P0.5930.121P
Proteome N/A