DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003027
GeneAtox1
SynonymsATX1
Desc.ATX1 (antioxidant protein 1) homolog 1 (yeast)
LocusNM_009720 chr11:55260145-55274640(-)
DB links


Entrez 11927
MGI 1333855
Ensembl ENSMUSG00000018585
Vega OTTMUSG00000005691
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002932
(v2.0)
Atox1NM_00972011927
427.90323.601114.565138.613551.686744.988274.868514.905556.535265.4002
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003027
(v1.0)
Atox111927
MGA0.96819
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002932
(v2.0)
Atox111927
614/442-0.0385386/442-0.310970/4420.9238184/4420.066623/442-2.1587170/442-1.9683
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002932
(v2.0)
Atox111927
299/211-0.0099165/211-0.468462/2111.7766164/2110.95948/211-2.521661/211-2.3611
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002932
(v2.0)
Atox111927
67.215411260.01
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002932
(v2.0)
Atox111927
18.01226030.02
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003027
(v1.0)
Atox1NM_00972011927
24.536810.052328.760735.994453.9851
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003027
(v1.0)
Atox1NM_00972011927
30.827411.255333.552742.67266.1543
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003027
(v1.0)
Atox1NM_00972011927
25.6554156.48810.9673
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003027
(v1.0)
Atox1NM_00972011927
25.04239.9513711.056
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003027
(v1.0)
Atox1NM_00972011927
11.430313.05
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003027
(v1.0)
Atox1NM_00972011927
25.6704154.34512.1258
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003027
(v1.0)
Atox1NM_00972011927
26.62834.754138.9729
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003027
(v1.0)
Atox1NM_00972011927
42.209249.8333
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003027
(v1.0)
Atox1NM_00972011927
5.180619.72671
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003027
(v1.0)
Atox1NM_00972011927
12.442212.3811
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003027
(v1.0)
12951H3155F02-5Atox111927
U032791NAP012035-001Atox1;TC930634,TC930633,TC930632,TC930631O08997U,F,24.13884.0824.09774.36164.53354.51834.6296
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003027
(v1.0)
1460639_a_atMm.217759Atox1NM_009720.211927
484.0500624.525802.175
0003027
(v1.0)
1415760_s_atMm.217759Atox1NM_009720.211927
297.150172.1420.075610.675
0003027
(v1.0)
1446802_atMm.217759Atox1NM_009720.211927
00145.75255.3191.15
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003027
(v1.0)
A_51_P346153Atox1NM_00972011927
11P0.9090.516P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003027
(v1.0)
Atox111927
3525173