DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003051
GeneAtp2b1
SynonymsPMCA1
Desc.ATPase, Ca++ transporting, plasma membrane 1
LocusNM_026482 chr10:98377786-98488777(+)
DB links


Entrez 67972
MGI 104653
Ensembl ENSMUSG00000019943
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   5 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002956
(v2.0)
Atp2b1NM_02648267972
27.413230.896519.10026.517468.020510.267329.538414.88999.627187.98991
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003051
(v1.0)
Atp2b167972
Maternal RNA0.96859
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002956
(v2.0)
Atp2b167972
857/3130.9381575/3130.7593165/3132.6312505/3132.0127139/3130.878755/3130.6693
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002956
(v2.0)
Atp2b167972
560/1301.5867282/1300.9955158/1303.7628449/1303.09565/1301.0343445/1301.1698
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002956
(v2.0)
Atp2b167972
37.360717521.35
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002956
(v2.0)
Atp2b167972
7.92111385.74
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003051
(v1.0)
Atp2b1NM_02648267972
32.106413.21954.848335.5570820.7381
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003051
(v1.0)
Atp2b1NM_02648267972
315.643146.84846.500964.1093166.022
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003051
(v1.0)
Atp2b1NM_02648267972
33.570210.025314.4227
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003051
(v1.0)
Atp2b1NM_02648267972
32.767813.086711.033
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003051
(v1.0)
Atp2b1NM_02648267972
180.373217.432
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003051
(v1.0)
Atp2b1NM_02648267972
33.58979.8879812.1006
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003051
(v1.0)
Atp2b1NM_02648267972
4.48885.365596.65412
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003051
(v1.0)
Atp2b1NM_02648267972
124.845113.588
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003051
(v1.0)
Atp2b1NM_02648267972
25.12381.91671
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003051
(v1.0)
Atp2b1NM_02648267972
9.7331812.8905
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003051
(v1.0)
17928L0033F05-3Mm.1034502810442I22Rik67972
U011949NAP093224-0012810442I22Rik;Atp2b2;TC886503Q9CSC0U,F3.40583.08062.8292.58332.7282.87082.9592
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003051
(v1.0)
1428936_atMm.166944Atp2b1NM_026482.267972
784.6251459.65362.1509.525964.95
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003051
(v1.0)
A_52_P348986Atp2b1NM_02648267972
11P0.3670.067P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003051
(v1.0)
Atp2b167972
6171219