DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003064
GeneAtp5f1
SynonymsC76477
Desc.ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
LocusNM_009725 chr3:105745781-105763166(-)
DB links


Entrez 11950
MGI 1100495
Ensembl ENSMUSG00000000563
Vega OTTMUSG00000027098
Featureprotein-coding
GO(BP)
GO(MF)
  •   2 Terms
      hydrogen ion transmembrane transporter activity (GO:0015078)
      hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933)
GO(CC)
  •   6 Terms
      mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) (GO:0000276)
      mitochondrion (GO:0005739)
      mitochondrial inner membrane (GO:0005743)
      mitochondrial proton-transporting ATP synthase complex (GO:0005753)
      membrane (GO:0016020)
      proton-transporting ATP synthase complex, coupling factor F(o) (GO:0045263)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002969
(v2.0)
Atp5f1NM_00972511950
92.146130.005227.043287.2926128.82175.1594106.59532.0887119.40288.6534
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003064
(v1.0)
Atp5f111950
MGA0.97817
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002969
(v2.0)
Atp5f111950
817/4350.3957645/4350.4512864/4354.55312492/4353.841814/435-2.813985/435-2.9327
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002969
(v2.0)
Atp5f111950
446/1880.7304342/1880.744799/1885.60012055/1884.76316/188-2.72150/188-2.4747
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002969
(v2.0)
Atp5f111950
53.27414337.25
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002969
(v2.0)
Atp5f111950
18.73410717.51
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003064
(v1.0)
Atp5f1NM_00972511950
31.179118.706464.98589.364875.5698
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003064
(v1.0)
Atp5f1NM_00972511950
11.07635.9372722.410829.603730.2904
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003064
(v1.0)
Atp5f1NM_00972511950
32.600633.698820.4091
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003064
(v1.0)
Atp5f1NM_00972511950
31.821418.518623.7626
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003064
(v1.0)
Atp5f1NM_00972511950
188.873334.822
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003064
(v1.0)
Atp5f1NM_00972511950
32.619533.237226.062
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003064
(v1.0)
Atp5f1NM_00972511950
60.16686.285382.3544
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003064
(v1.0)
Atp5f1NM_00972511950
44.004456.86
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003064
(v1.0)
Atp5f1NM_00972511950
6.3612950.1236
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003064
(v1.0)
Atp5f1NM_00972511950
17.789612.6695
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003064
(v1.0)
4100C0915G06-3Mm.148721Atp5f111950
TC8214962.58972.70962.46992.49012.48342.46022.421
0003064
(v1.0)
21647L0901C06-3Mm.148721Atp5f111950
U024480NAP036971-1Atp5f1;TC9286502.39322.36372.21852.39332.58962.60022.5039
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003064
(v1.0)
1426742_atMm.251152Atp5f1NM_009725.311950
253.875156.8344.1607.45937.925
0003064
(v1.0)
1433562_s_atMm.251152Atp5f1NM_009725.311950
752.475449.3963.61753.352537.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003064
(v1.0)
A_51_P168708Atp5f1NM_00972511950
11P0.3350.0668P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003064
(v1.0)
Atp5f111950
333585