DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003065
GeneAtp5g1
Synonyms
Desc.ATP synthase, H+ transporting, mitochondrial F0 complex, subunit c1 (subunit 9)
LocusNM_007506 chr11:95934107-95937008(-)
NM_001161419 chr11:95934107-95936945(-)
DB links


Entrez 11951
MGI 107653
Ensembl ENSMUSG00000006057
Vega OTTMUSG00000006275
Featureprotein-coding
GO(BP)
GO(MF)
  •   2 Terms
GO(CC)
  •   8 Terms
      mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) (GO:0000276)
      mitochondrion (GO:0005739)
      mitochondrial inner membrane (GO:0005743)
      mitochondrial proton-transporting ATP synthase complex (GO:0005753)
      membrane (GO:0016020)
      integral to membrane (GO:0016021)
      proton-transporting two-sector ATPase complex, proton-transporting domain (GO:0033177)
      proton-transporting ATP synthase complex, coupling factor F(o) (GO:0045263)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2002970
(v2.0)
Atp5g1NM_001161419,NM_00750611951
161.71270.407913.8592134.252123.605374.91380.598725.6491122.299464.036
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003065
(v1.0)
Atp5g111951
Major ZGA0.91121
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002970
(v2.0)
Atp5g111951
506/413-0.2192294/413-0.604766/4130.9354149/413-0.138780/413-0.3068474/413-0.3995
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2002970
(v2.0)
Atp5g111951
248/212-0.2851126/212-0.861359/2121.6997132/2120.641611/212-2.113286/212-1.8826
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002970
(v2.0)
Atp5g111951
49.237913237.3
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2002970
(v2.0)
Atp5g111951
12.43368814.13
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003065
(v1.0)
Atp5g1NM_001161419,NM_00750611951
73.0719.62888100.03785.949557.6458
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003065
(v1.0)
Atp5g1NM_001161419,NM_00750611951
6.940022.3630322.814431.235810.1145
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003065
(v1.0)
Atp5g1NM_001161419,NM_00750611951
76.402459.139710.5053
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003065
(v1.0)
Atp5g1NM_001161419,NM_00750611951
74.57639.532219.0956
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003065
(v1.0)
Atp5g1NM_001161419,NM_00750611951
0.6919620.543171
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003065
(v1.0)
Atp5g1NM_001161419,NM_00750611951
76.446858.329720.9434
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003065
(v1.0)
Atp5g1NM_001161419,NM_00750611951
92.618582.987784.5105
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003065
(v1.0)
Atp5g1NM_001161419,NM_00750611951
30.895929.6586
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003065
(v1.0)
Atp5g1NM_001161419,NM_00750611951
10.0034277.889
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003065
(v1.0)
Atp5g1NM_001161419,NM_00750611951
12.95035.58353
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003065
(v1.0)
854C0152A07-3Mm.258Atp5g111951
Atp5g13.44783.42464.00064.47494.45844.51474.5493
0003065
(v1.0)
11568H3119A04-3Mm.258Atp5g111951
Atp5g12.59532.8472.96142.93732.6892.89212.8029
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003065
(v1.0)
1416020_a_atMm.258Atp5g1NM_001161419.1,NM_007506.611951
466.4750497.675932.251110.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003065
(v1.0)
A_51_P183292Atp5g1NM_00750611951
11P0.7190.202P
Proteome N/A