DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003111
GeneAtp9a
SynonymsClass II
IIa
Desc.ATPase, class II, type 9A
LocusNM_015731 chr2:168459938-168567300(-)
DB links


Entrez 11981
MGI 1330826
Ensembl ENSMUSG00000027546
Vega OTTMUSG00000016114
Featureprotein-coding
GO(BP)
GO(MF)
  •   9 Terms
      nucleotide binding (GO:0000166)
      magnesium ion binding (GO:0000287)
      catalytic activity (GO:0003824)
      phospholipid-translocating ATPase activity (GO:0004012)
      ATP binding (GO:0005524)
      ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism (GO:0015662)
      hydrolase activity (GO:0016787)
      hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances (GO:0016820)
      metal ion binding (GO:0046872)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003016
(v2.0)
Atp9aNM_001289445,NM_001289446,NM_01573111981
31.239931.202330.172410.295915.10056.604250.036386445.270613.77666.9655
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003111
(v1.0)
Atp9a11981
Maternal RNA0.9644
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003016
(v2.0)
Atp9a11981
674/4320.1286395/432-0.244838/4320.0916202/4320.2334178/4320.77291364/4321.0577
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003016
(v2.0)
Atp9a11981
321/1450.6302181/1450.202427/1451.1126144/1451.306570/1450.9868616/1451.4812
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003016
(v2.0)
Atp9a11981
75.541714253.2
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003016
(v2.0)
Atp9a11981
10.39217414.04
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003111
(v1.0)
Atp9aNM_01573111981
31.784320.60777.5164410.25720.0167446
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003111
(v1.0)
Atp9aNM_01573111981
165.643114.70532.452877.48660.0195135
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003111
(v1.0)
Atp9aNM_01573111981
33.233411.206622.4835
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003111
(v1.0)
Atp9aNM_01573111981
32.439120.400833.1221
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003111
(v1.0)
Atp9aNM_01573111981
136.069296.924
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003111
(v1.0)
Atp9aNM_01573111981
33.252711.053136.3272
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003111
(v1.0)
Atp9aNM_01573111981
6.959069.903779.35644
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003111
(v1.0)
Atp9aNM_01573111981
74.814646.6741
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003111
(v1.0)
Atp9aNM_01573111981
12.5840.616015
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003111
(v1.0)
Atp9aNM_01573111981
0.1573691.77012
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003111
(v1.0)
12823H3152H05-3Mm.10288Atp9a11981
U023696NAP097392-001Atp9a;TC919153,TC919146,TC919145,TC919144O70228U,F,24.20944.32334.45144.27474.10254.2794.1455
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003111
(v1.0)
1427604_a_atMm.330819Atp9aNM_015731.311981
9670.37589.72572.155.825
0003111
(v1.0)
1415932_x_atMm.330819Atp9aNM_015731.311981
159.075137.575134.35108.42584.775
0003111
(v1.0)
1425838_atMm.330819Atp9aNM_015731.311981
000076.75
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003111
(v1.0)
Atp9a11981
220220