DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003119
GeneAtrip
Synonyms
Desc.ATR interacting protein
LocusNM_172774 chr9:108962261-108976638(-)
DB links


Entrez 235610
MGI 1925349
Ensembl ENSMUSG00000025646
Vega OTTMUSG00000033648
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003023
(v2.0)
AtripNM_172774235610
2.90454.444284.961616.24098.596826.36937.638067.054019.734968.45022
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003119
(v1.0)
Atrip235610
MGA0.97231
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003023
(v2.0)
Atrip235610
653/4480.0307447/448-0.1191186/4482.3021338/4480.92110/448-3.3035115/448-2.5456
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003023
(v2.0)
Atrip235610
311/2070.0741192/207-0.2236182/2073.3411323/2071.96025/207-3.079556/207-2.4539
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003023
(v2.0)
Atrip235610
70.217912854.86
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003023
(v2.0)
Atrip235610
21.85367628.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003119
(v1.0)
AtripNM_172774235610
4.620433.463024.649995.969295.41339
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003119
(v1.0)
AtripNM_001012236,NM_011637,NM_172774235610
14.62738.156479.8866415.550527.3982
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003119
(v1.0)
AtripNM_172774235610
4.831081.062213.77823
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003119
(v1.0)
AtripNM_172774235610
4.715613.428255.22656
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003119
(v1.0)
AtripNM_172774235610
7.1371637.6779
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003119
(v1.0)
AtripNM_172774235610
4.833891.047665.73231
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003119
(v1.0)
AtripNM_172774235610
4.305165.763596.74301
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003119
(v1.0)
AtripNM_172774235610
31.851823.4197
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003119
(v1.0)
AtripNM_172774235610
2.411631.5513
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003119
(v1.0)
AtripNM_172774235610
00.364772
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome N/A