DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003120
GeneAtrn
SynonymsMgca
Desc.attractin
LocusNM_009730 chr2:130732232-130856062(+)
DB links


Entrez 11990
MGI 1341628
Ensembl ENSMUSG00000027312
Vega OTTMUSG00000015539
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003024
(v2.0)
AtrnNM_00973011990
5.5979113.49357.093147.080756.248531.630325.857217.568645.821.60151
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003120
(v1.0)
Atrn11990
Maternal RNA0.99101
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003024
(v2.0)
Atrn11990
725/4420.2007442/442-0.115997/4421.3888254/4420.529538/442-1.4582260/442-1.3598
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003024
(v2.0)
Atrn11990
380/2080.3551220/208-0.035195/2082.4038245/2081.55615/208-1.6712119/208-1.3936
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003024
(v2.0)
Atrn11990
61.722811553.67
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003024
(v2.0)
Atrn11990
15.32486722.87
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003120
(v1.0)
AtrnNM_00973011990
14.02724.899575.267694.331694.12715
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003120
(v1.0)
AtrnNM_00973011990
70.515427.588924.370124.778515.3096
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003120
(v1.0)
AtrnNM_00973011990
14.66672.047215.34554
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003120
(v1.0)
AtrnNM_00973011990
14.31624.850385.60681
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003120
(v1.0)
AtrnNM_00973011990
32.437931.6004
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003120
(v1.0)
AtrnNM_00973011990
14.67532.019176.14936
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003120
(v1.0)
AtrnNM_00973011990
4.877064.182424.01829
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003120
(v1.0)
AtrnNM_00973011990
31.124127.7149
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003120
(v1.0)
AtrnNM_00973011990
7.918052.21394
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003120
(v1.0)
AtrnNM_00973011990
2.600794.60816
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003120
(v1.0)
11412H3115A02-3Atrn11990
U042374NAP095260-001Atrn;TC864469,TC864468Q9WU60U,F2.77342.68772.67822.82682.59362.69472.5808
0003120
(v1.0)
19676L0289E04-3Mm.27165AW55801099420
U042374NAP031922-1Atrn;TC864469Q9WU60U,F3.55453.14573.04673.07133.64243.32783.4633
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003120
(v1.0)
1421166_atMm.119936AtrnNM_009730.211990
055.429.725035.1
Agilent44K N/A
Proteome N/A