DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003129
GeneAtxn7
Synonymsataxin-7
Sca7
Desc.ataxin 7
LocusNM_139227 chr14:14845005-14939815(+)
DB links


Entrez 246103
MGI 2179277
Ensembl ENSMUSG00000021738
Featureprotein-coding
GO(BP)
  •   7 Terms
      microtubule cytoskeleton organization (GO:0000226)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      histone deubiquitination (GO:0016578)
      negative regulation of phosphorylation (GO:0042326)
      negative regulation of insulin-like growth factor receptor signaling pathway (GO:0043569)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003033
(v2.0)
Atxn7NM_139227246103
2.6849317.315431.22238.936544.0581.46843.6151231.337336.77091.13408
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003129
(v1.0)
Atxn7246103
MGA0.99259
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003033
(v2.0)
Atxn7246103
639/3340.4221470/3340.3756111/3341.9732245/3340.879340/334-0.9862166/334-1.5992
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003033
(v2.0)
Atxn7246103
342/1161.0407225/1160.8341106/1163.341229/1162.287815/116-0.851162/116-1.4807
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003033
(v2.0)
Atxn7246103
41.727511536.28
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003033
(v2.0)
Atxn7246103
6.2785778.15
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003129
(v1.0)
Atxn7NM_139227246103
18.000421.595728.946330.48962.53477
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003129
(v1.0)
Atxn7FR055186,FR279830,NM_139227246103
109.305121.632132.638111.3199.22031
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003129
(v1.0)
Atxn7NM_139227246103
18.82110.98190823.5613
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003129
(v1.0)
Atxn7NM_139227246103
18.371221.378823.2117
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003129
(v1.0)
Atxn7FR055186,FR279830,NM_139227246103
146.723162.937
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003129
(v1.0)
Atxn7NM_139227246103
18.8320.96845925.4578
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003129
(v1.0)
Atxn7NM_139227246103
26.799729.438925.3971
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003129
(v1.0)
Atxn7FR055186,FR279830,NM_139227246103
107.71106.761
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003129
(v1.0)
Atxn7NM_139227246103
17.444133.7113
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003129
(v1.0)
Atxn7NM_139227246103
1.968193.5178
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003129
(v1.0)
1436175_atMm.133625Atxn7NM_139227.4246103
367.35446.45456.4999.85657.5
0003129
(v1.0)
1442186_atMm.133625Atxn7NM_139227.4246103
0352.85000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003129
(v1.0)
A_51_P518592Sca7NM_139227246103
11P0.4970.156P
Proteome N/A