DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003143
GeneAvl9
Synonyms
Desc.AVL9 homolog (S. cerevisiase)
LocusNM_030235 chr6:56664899-56711905(+)
DB links


Entrez 78937
MGI 1926187
Ensembl ENSMUSG00000029787
Vega OTTMUSG00000039874
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003047
(v2.0)
Avl9NM_03023578937
7.501457.9519116.22435.000765.79275.7969710.226713.337256.23075.27051
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003143
(v1.0)
Avl978937
MGA0.98727
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003047
(v2.0)
Avl978937
614/3280.3907483/3280.441160/3282.522406/3281.631650/328-0.6455442/328-0.1685
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003047
(v2.0)
Avl978937
330/1640.4934270/1640.6001155/1643.4259374/1642.502510/164-1.8765168/164-0.5604
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003047
(v2.0)
Avl978937
36.744811332.52
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003047
(v2.0)
Avl978937
8.92118410.62
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003143
(v1.0)
Avl9NM_03023578937
8.2634511.206226.03245.57927.20008
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003143
(v1.0)
Avl9NM_03023578937
10.920214.194846.745793.191514.5086
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003143
(v1.0)
Avl9NM_03023578937
8.640192.7433612.2263
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003143
(v1.0)
Avl9NM_03023578937
8.4336811.09379.87567
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003143
(v1.0)
Avl9NM_03023578937
205.302147.63
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003143
(v1.0)
Avl9NM_03023578937
8.645212.7057810.8313
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003143
(v1.0)
Avl9NM_03023578937
24.101644.008638.8087
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003143
(v1.0)
Avl9NM_03023578937
101.85103.183
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003143
(v1.0)
Avl9NM_03023578937
8.1993621.3669
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003143
(v1.0)
Avl9NM_03023578937
1.177945.44509
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003143
(v1.0)
15515K0154G07-3Mm.1053435830411G16Rik78937
U006913NAP006828-001TC854825Q9D296U,F,22.50662.59862.63492.54482.47192.49532.4084
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003143
(v1.0)
1434659_atMm.105343Avl9NM_030235.178937
141.925211.425262.925566.4121.925
0003143
(v1.0)
1430144_atMm.105343Avl9NM_030235.178937
00178.125309.1750
Agilent44K N/A
Proteome N/A