DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003151
GeneAxin1
Synonyms
Desc.axin 1
LocusNM_001159598 chr17:26275631-26332756(+)
NM_009733 chr17:26275631-26332756(+)
DB links


Entrez 12005
MGI 1096327
Ensembl ENSMUSG00000024182
Vega OTTMUSG00000026498
Featureprotein-coding
GO(BP)
  •   57 Terms
      protein polyubiquitination (GO:0000209)
      in utero embryonic development (GO:0001701)
      optic placode formation (GO:0001743)
      regulation of protein phosphorylation (GO:0001932)
      positive regulation of protein phosphorylation (GO:0001934)
      nucleocytoplasmic transport (GO:0006913)
      apoptotic process (GO:0006915)
      activation of JUN kinase activity (GO:0007257)
      multicellular organismal development (GO:0007275)
      determination of left/right symmetry (GO:0007368)
      sensory perception of sound (GO:0007605)
      adult walking behavior (GO:0007628)
      cell death (GO:0008219)
      dorsal/ventral axis specification (GO:0009950)
      dorsal/ventral pattern formation (GO:0009953)
      positive regulation of peptidyl-threonine phosphorylation (GO:0010800)
      Wnt receptor signaling pathway (GO:0016055)
      hemoglobin metabolic process (GO:0020027)
      forebrain anterior/posterior pattern specification (GO:0021797)
      Wnt receptor signaling pathway involved in forebrain neuron fate commitment (GO:0021881)
      protein catabolic process (GO:0030163)
      negative regulation of Wnt receptor signaling pathway (GO:0030178)
      positive regulation of transforming growth factor beta receptor signaling pathway (GO:0030511)
      olfactory placode formation (GO:0030910)
      cytoplasmic microtubule organization (GO:0031122)
      positive regulation of protein ubiquitination (GO:0031398)
      activation of protein kinase activity (GO:0032147)
      positive regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032436)
      positive regulation of peptidyl-serine phosphorylation (GO:0033138)
      erythrocyte homeostasis (GO:0034101)
      negative regulation of transcription elongation from RNA polymerase II promoter (GO:0034244)
      regulation of catenin import into nucleus (GO:0035412)
      post-anal tail morphogenesis (GO:0036342)
      termination of G-protein coupled receptor signaling pathway (GO:0038032)
      positive regulation of JUN kinase activity (GO:0043507)
      cellular protein complex assembly (GO:0043623)
      negative regulation of fat cell differentiation (GO:0045599)
      positive regulation of protein catabolic process (GO:0045732)
      positive regulation of protein kinase activity (GO:0045860)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of JNK cascade (GO:0046330)
      embryonic eye morphogenesis (GO:0048048)
      axial mesoderm development (GO:0048318)
      axial mesoderm formation (GO:0048320)
      neurological system process (GO:0050877)
      negative regulation of protein metabolic process (GO:0051248)
      protein homooligomerization (GO:0051260)
      positive regulation of ubiquitin-protein ligase activity (GO:0051443)
      muscle cell development (GO:0055001)
      canonical Wnt receptor signaling pathway (GO:0060070)
      embryonic skeletal joint morphogenesis (GO:0060272)
      canonical Wnt receptor signaling pathway involved in neural plate anterior/posterior pattern formation (GO:0060823)
      cellular response to organic cyclic compound (GO:0071407)
      genetic imprinting (GO:0071514)
      negative regulation of canonical Wnt receptor signaling pathway (GO:0090090)
      Wnt receptor signaling pathway involved in somitogenesis (GO:0090244)
      positive regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:2000060)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003055
(v2.0)
Axin1NM_001159598,NM_00973312005
13.169125.8754.308553.647637.249810.883618.326962.122536.11239.72326
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003151
(v1.0)
Axin112005
Minor ZGA0.89106
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003055
(v2.0)
Axin112005
720/4410.194399/441-0.2599136/4411.8753290/4410.723322/441-2.2168223/441-1.5766
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003055
(v2.0)
Axin112005
322/1770.3487166/177-0.2075128/1773.049259/1771.86578/177-2.273477/177-1.7802
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003055
(v2.0)
Axin112005
56.019411150.47
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003055
(v2.0)
Axin112005
19.20467127.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003151
(v1.0)
Axin1NM_001159598,NM_00973312005
26.893237.790939.954425.833612.943
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003151
(v1.0)
Axin1NM_001159598,NM_00973312005
60.3315120.194120.58567.942926.1275
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003151
(v1.0)
Axin1NM_001159598,NM_00973312005
28.11934.8163641.2307
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003151
(v1.0)
Axin1NM_001159598,NM_00973312005
27.447237.411546.021
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003151
(v1.0)
Axin1NM_001159598,NM_00973312005
260.609286.707
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003151
(v1.0)
Axin1NM_001159598,NM_00973312005
28.13564.750450.4743
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003151
(v1.0)
Axin1NM_001159598,NM_00973312005
36.991524.943424.9857
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003151
(v1.0)
Axin1NM_001159598,NM_00973312005
71.254381.6923
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003151
(v1.0)
Axin1NM_001159598,NM_00973312005
17.02995.59276
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003151
(v1.0)
Axin1NM_001159598,NM_00973312005
17.74911.2294
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003151
(v1.0)
10976H3106D02-3Mm.23684Axin12005
U017701NAP003573-001Axin;TC826165O35625U,F,23.5733.55013.60773.5743.49013.44673.4687
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003151
(v1.0)
1426966_atMm.23684Axin1NM_009733.2,NM_001159598.112005
186.775254.6347.95096.925
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003151
(v1.0)
Axin112005
001002