DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003246
GeneBC005537
Synonyms
Desc.cDNA sequence BC005537
LocusNM_024473 chr13:24893526-24904768(+)
DB links


Entrez 79555
MGI 2441726
Ensembl ENSMUSG00000019132
Vega OTTMUSG00000000607
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003145
(v2.0)
BC005537NM_02447379555
93.94517.5148812.853133.554448.729226.983735.000315.214836.669124.3584
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003246
(v1.0)
BC00553779555
MGA0.9805
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003145
(v2.0)
BC00553779555
815/3640.6486583/3640.5621906/3644.87093184/3644.450634/364-1.3371267/364-1.0422
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003145
(v2.0)
BC00553779555
486/1830.8927296/1830.575756/1835.55692046/1834.79529/183-2.1684107/183-1.3612
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003145
(v2.0)
BC00553779555
48.830617927.28
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003145
(v2.0)
BC00553779555
8.92331326.76
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003246
(v1.0)
BC005537NM_02447379555
7.813758.8773824.942633.739624.3378
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003246
(v1.0)
BC005537FR218110,FR274916,FR276363,NM_02447379555
42.145142.106490.0836148.115109.011
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003246
(v1.0)
BC005537NM_02447379555
8.1699934.35679.68542
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003246
(v1.0)
BC005537NM_02447379555
7.974728.7882511.3122
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003246
(v1.0)
BC005537FR218110,FR274916,FR276363,NM_02447379555
42.64421.1555
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003246
(v1.0)
BC005537NM_02447379555
8.1747433.886112.4068
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003246
(v1.0)
BC005537NM_02447379555
23.09332.576925.425
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003246
(v1.0)
BC005537FR218110,FR274916,FR276363,NM_02447379555
38.714329.9722
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003246
(v1.0)
BC005537NM_02447379555
9.2312927.6201
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003246
(v1.0)
BC005537NM_02447379555
4.056782.2082
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003246
(v1.0)
11051H3107F03-3Mm.22749BC00553779555
U014663NAP109943-1BC005537;TC897198Q99K03U,F,22.94173.00162.86632.89342.85962.93853.1272
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003246
(v1.0)
1450877_atMm.266668BC005537NM_024473.379555
105.25148.775201.275246.575532.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003246
(v1.0)
A_51_P130994BC005537BC00553779555
11P0.8620.378P
Proteome N/A