DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003330
GeneBC057079
SynonymsFocad
Desc.focadhesin
LocusNM_001081184 chr4:87740534-88056915(+)
DB links


Entrez 230393
MGI 2676921
Ensembl ENSMUSG00000038368
Vega OTTMUSG00000019865
Featureprotein-coding
GO(BP)
Ver2_FPKM N/A
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003330
(v1.0)
BC057079230393
Major ZGA0.90793
SPR_Histone_Erkek_+-5KfromTSS N/A
SPR_Histone_Erkek_+-2KfromTSS N/A
SPR_Methy_Kobayashi_+-5KfromTSS N/A
SPR_Methy_Kobayashi_+-2KfromTSS N/A
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003330
(v1.0)
BC057079NM_001081184230393
20.805826.141740.991834.77915.3267
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003330
(v1.0)
BC057079FR214768,FR392602,NM_001081184230393
140.103112.07681.6486115.66284.2438
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003330
(v1.0)
BC057079NM_001081184230393
21.75441.4737828.5212
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003330
(v1.0)
BC057079NM_001081184230393
21.234425.879224.962
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003330
(v1.0)
BC057079FR214768,FR392602,NM_001081184230393
123.784176.136
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003330
(v1.0)
BC057079NM_001081184230393
21.7671.4535927.3775
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003330
(v1.0)
BC057079NM_001081184230393
37.95233.580630.208
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003330
(v1.0)
BC057079FR214768,FR392602,NM_001081184230393
109.418101.626
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003330
(v1.0)
BC057079NM_001081184230393
2.6608714.5871
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003330
(v1.0)
BC057079NM_001081184230393
1.291541.98955
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003330
(v1.0)
3905C0906A05-3Mm.23873230393
U004478NAP002160-001LOC230393TC887976,TC887975U,F,22.85742.94292.82422.67852.8722.75852.8049
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003330
(v1.0)
1435209_atMm.287210BC057079NM_001081184.1230393
673.1000389.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003330
(v1.0)
A_52_P202276BC057079AK122556230393
11P0.5940.202P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003330
(v1.0)
BC057079230393
250280