DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003359
GeneBach1
Synonyms
Desc.BTB and CNC homology 1
LocusNM_007520 chr16:87699199-87733591(+)
DB links


Entrez 12013
MGI 894680
Ensembl ENSMUSG00000025612
Vega OTTMUSG00000026479
Featureprotein-coding
GO(BP)
  •   6 Terms
      regulation of transcription involved in G1/S phase of mitotic cell cycle (GO:0000083)
      regulation of transcription involved in G2/M-phase of mitotic cell cycle (GO:0000117)
      negative regulation of transcription from RNA polymerase II promoter (GO:0000122)
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      regulation of transcription from RNA polymerase II promoter in response to hypoxia (GO:0061418)
GO(MF)
  •   5 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription (GO:0001078)
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
      protein binding (GO:0005515)
      sequence-specific DNA binding (GO:0043565)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003237
(v2.0)
Bach1NM_00752012013
14.79665.493217.49229116.045172.78613.354311.23596.21909159.53810.4745
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003359
(v1.0)
Bach112013
MGA0.95728
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003237
(v2.0)
Bach112013
621/437-0.0058381/437-0.3132131/4371.8345382/4371.1327118/4370.1674781/4370.2378
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003237
(v2.0)
Bach112013
326/1920.2498194/192-0.1007120/1922.8466328/1922.089550/1920.1143347/1920.2533
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003237
(v2.0)
Bach112013
64.755416140.22
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003237
(v2.0)
Bach112013
23.834511121.47
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003359
(v1.0)
Bach1NM_00752012013
5.709845.2109686.393119.9777.82462
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003359
(v1.0)
Bach1NM_00752012013
7.988937.3298493.4832139.7698.89065
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003359
(v1.0)
Bach1NM_00752012013
5.970165.411265.68527
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003359
(v1.0)
Bach1NM_00752012013
5.827475.158644.61281
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003359
(v1.0)
Bach1NM_00752012013
55.863837.0843
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003359
(v1.0)
Bach1NM_00752012013
5.973635.337155.05917
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003359
(v1.0)
Bach1NM_00752012013
79.9865115.842110.125
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003359
(v1.0)
Bach1NM_00752012013
138.257132.996
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003359
(v1.0)
Bach1NM_00752012013
1.9815916.2369
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003359
(v1.0)
Bach1NM_00752012013
0.05553850.114625
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003359
(v1.0)
1449311_atMm.26147Bach1NM_007520.212013
00148.75414.025152.825
0003359
(v1.0)
1440831_atMm.26147Bach1NM_007520.212013
00632.152796.125826.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003359
(v1.0)
A_52_P412465Bach1NM_00752012013
11P0.3290.0671P
Proteome N/A