DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003407
GeneBbs5
Synonyms
Desc.Bardet-Biedl syndrome 5 (human)
LocusNM_028284 chr2:69485312-69505626(+)
DB links


Entrez 72569
MGI 1919819
Ensembl ENSMUSG00000063145
Vega OTTMUSG00000012987
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
      phosphatidylinositol-3-phosphate binding (GO:0032266)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003286
(v2.0)
Bbs5NM_02828472569
7.4614410.007715.84816.901549.736942.698454.0352814.17089.558922.4411
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003407
(v1.0)
Bbs572569
1-Cell Transient0.95709
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003286
(v2.0)
Bbs572569
620/3780.2006513/3780.3236539/3784.07011378/3783.1889143/3780.6497925/3780.6903
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003286
(v2.0)
Bbs572569
294/1500.4554234/1500.5224506/1505.24591225/1504.338281/1501.147515/1501.1749
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003286
(v2.0)
Bbs572569
81.428814755.39
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003286
(v2.0)
Bbs572569
27.23298731.3
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003407
(v1.0)
Bbs5NM_02828472569
10.391810.96165.126576.765432.87191
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003407
(v1.0)
Bbs5NM_02828472569
30.426121.972115.36315.002610.179
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003407
(v1.0)
Bbs5NM_02828472569
10.86562.7287311.9593
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003407
(v1.0)
Bbs5NM_02828472569
10.605910.851510.529
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003407
(v1.0)
Bbs5NM_02828472569
20.019537.4469
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003407
(v1.0)
Bbs5NM_02828472569
10.87192.6913511.5478
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003407
(v1.0)
Bbs5NM_02828472569
4.746416.532296.59312
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003407
(v1.0)
Bbs5NM_02828472569
17.139313.1692
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003407
(v1.0)
Bbs5NM_02828472569
4.2483518.7461
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003407
(v1.0)
Bbs5NM_02828472569
15.146420.2927
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003407
(v1.0)
1429762_a_atMm.252136Bbs5NM_028284.272569
847.1751334.85451.825320.350
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003407
(v1.0)
A_51_P456136Bbs5NM_02828472569
11P0.5380.102P
0003407
(v1.0)
A_52_P27012Bbs5NM_02828472569
11P0.8960.651P
Proteome N/A