DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003422
GeneBcat2
SynonymsBcat-2
Eca40
Desc.branched chain aminotransferase 2, mitochondrial
LocusNM_009737 chr7:52825523-52845080(+)
NM_001243052 chr7:52826649-52845080(+)
NM_001243053 chr7:52828240-52845080(+)
DB links


Entrez 12036
MGI 1276534
Ensembl ENSMUSG00000030826
Vega OTTMUSG00000030313
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003304
(v2.0)
Bcat2NM_001243052,NM_001243053,NM_00973712036
20.473449.536162.57368.432439.2466172.242426.6461101.316.8608484.877
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003422
(v1.0)
Bcat212036
Maternal RNA0.96098
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003304
(v2.0)
Bcat212036
670/516-0.1358378/516-0.5638105/5161.2842376/5160.871567/516-0.8776452/516-0.7884
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003304
(v2.0)
Bcat212036
243/200-0.2306145/200-0.576652/2001.6002192/2001.261819/200-1.2939119/200-1.3373
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003304
(v2.0)
Bcat212036
79.381616448.4
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003304
(v2.0)
Bcat212036
11.87687116.73
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003422
(v1.0)
Bcat2NM_00973712036
56.203547.42976.848776.9939620.5418
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003422
(v1.0)
Bcat2NM_00973712036
381.037287.8824.61828.472940.0497
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003422
(v1.0)
Bcat2NM_00973712036
58.76598.1748851.7468
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003422
(v1.0)
Bcat2NM_00973712036
57.361446.953482.0997
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003422
(v1.0)
Bcat2NM_00973712036
181.023311.082
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003422
(v1.0)
Bcat2NM_00973712036
58.80018.0629190.0442
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003422
(v1.0)
Bcat2NM_00973712036
6.340896.752955.22875
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003422
(v1.0)
Bcat2NM_00973712036
67.595555.8733
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003422
(v1.0)
Bcat2NM_00973712036
0.4776541.05822
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003422
(v1.0)
Bcat2NM_00973712036
0.6174261.2743
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003422
(v1.0)
19254L0260F04-3Mm.24210Bcat212036
U008081NAP097259-001Bcat2;TC926307O358552.8052.89112.9142.84832.87432.88322.8092
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003422
(v1.0)
1425764_a_atMm.24210Bcat2NM_009737.212036
000036.275
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003422
(v1.0)
A_51_P181448Bcat2NM_00973712036
11P1.5020.201P
0003422
(v1.0)
A_52_P393781Bcat2NM_00973712036
11P1.5230.199P
Proteome N/A