DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003427
GeneBckdhb
Synonyms
Desc.branched chain ketoacid dehydrogenase E1, beta polypeptide
LocusNM_199195 chr9:83842388-84017847(+)
DB links


Entrez 12040
MGI 88137
Ensembl ENSMUSG00000032263
Featureprotein-coding
GO(BP)
GO(MF)
  •   5 Terms
      catalytic activity (GO:0003824)
      alpha-ketoacid dehydrogenase activity (GO:0003826)
      3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity (GO:0003863)
      oxidoreductase activity (GO:0016491)
      protein complex binding (GO:0032403)
GO(CC)
  •   3 Terms
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003309
(v2.0)
BckdhbNM_19919512040
3.420811.675815.928710.393810.8799.3909110.630212.323612.4318.91544
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003427
(v1.0)
Bckdhb12040
1-Cell Transient0.99673
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003309
(v2.0)
Bckdhb12040
219/1470.0619155/147-0.03956/147-0.905714/147-1.98610/147-1.722736/147-2.5794
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003309
(v2.0)
Bckdhb12040
67/410.191432/41-0.46050/41-2.13054/41-1.79034/41-1.117411/41-2.3461
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003309
(v2.0)
Bckdhb12040
31.97833494.05
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003309
(v2.0)
Bckdhb12040
12.76351398.18
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003427
(v1.0)
BckdhbNM_19919512040
12.134210.99217.736817.541847.58541
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003427
(v1.0)
BckdhbNM_19919512040
17.155815.271215.288513.99729.67894
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003427
(v1.0)
BckdhbNM_19919512040
12.68751.2510211.9926
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003427
(v1.0)
BckdhbNM_19919512040
12.384210.88179.10887
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003427
(v1.0)
BckdhbNM_19919512040
25.334723.9846
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003427
(v1.0)
BckdhbNM_19919512040
12.69481.233899.9903
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003427
(v1.0)
BckdhbNM_19919512040
7.163087.281948.6231
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003427
(v1.0)
BckdhbNM_19919512040
10.846714.1717
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003427
(v1.0)
BckdhbNM_19919512040
13.26040.78046
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003427
(v1.0)
BckdhbNM_19919512040
7.355958.63018
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003427
(v1.0)
1427153_atMm.12819BckdhbNM_199195.112040
225.425262.87579.575111.3132.75
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003427
(v1.0)
A_51_P102782BckdhbNM_19919512040
11P0.8820.43P
0003427
(v1.0)
A_52_P416879BckdhbNM_19919512040
11P1.030.82P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003427
(v1.0)
Bckdhb12040
001001