DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003467
GeneBecn1
SynonymsAtg6
Desc.beclin 1, autophagy related
LocusNM_019584 chr11:101149581-101163581(-)
DB links


Entrez 56208
MGI 1891828
Ensembl ENSMUSG00000035086
Vega OTTMUSG00000002791
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003349
(v2.0)
Becn1NM_01958456208
48.985228.978343.171847.008839.390233.140939.81336.36737.243233.6345
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003467
(v1.0)
Becn156208
2-Cell Transient0.83731
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003349
(v2.0)
Becn156208
681/3860.3055429/3860.0361137/3862.0725318/3861.046987/386-0.0907673/3860.2022
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003349
(v2.0)
Becn156208
342/1720.4764186/172-0.0033131/1723.1208296/1722.098428/172-0.545196/172-0.4082
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003349
(v2.0)
Becn156208
71.588912358.2
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003349
(v2.0)
Becn156208
23.56497232.73
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003467
(v1.0)
Becn1NM_01958456208
30.125330.040535.027227.378628.0231
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003467
(v1.0)
Becn1FR222433,NM_01958456208
112.245187.61117.419189.751199.439
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003467
(v1.0)
Becn1NM_01958456208
31.498817.914432.7748
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003467
(v1.0)
Becn1NM_01958456208
30.745929.738926.9689
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003467
(v1.0)
Becn1FR222433,NM_01958456208
184.694206.43
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003467
(v1.0)
Becn1NM_01958456208
31.517117.66929.5785
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003467
(v1.0)
Becn1NM_01958456208
32.429726.435225.7641
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003467
(v1.0)
Becn1NM_01958456208
144.583172.452
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003467
(v1.0)
Becn1NM_01958456208
25.541317.7298
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003467
(v1.0)
Becn1NM_01958456208
33.380937.6084
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003467
(v1.0)
19674L0289D04-3Mm.178947Becn156208
U033452NAP000365-003Becn1;TC799368,TC799367,TC799366,TC799365Q9D9L8U,F,23.58053.37182.97073.24982.71072.92382.8357
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003467
(v1.0)
1460320_atMm.178947Becn1NM_019584.356208
94.825178.45196.7596.3145.975
0003467
(v1.0)
1435219_x_atMm.178947Becn1NM_019584.356208
43.675097.160.87570.85
0003467
(v1.0)
1455880_s_atMm.178947Becn1NM_019584.356208
171.825326.55362.6128.2180.975
0003467
(v1.0)
1439405_x_atMm.178947Becn1NM_019584.356208
1504.0753385.952854.2251382.51756.95
0003467
(v1.0)
1430358_atMm.178947Becn1NM_019584.356208
357.85427.175536.7472.7339.175
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003467
(v1.0)
A_51_P489337Becn1NM_01958456208
11P0.5090.101P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0003467
(v1.0)
Becn156208
100100