DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003530
GeneBmi1
SynonymsBmi-1
Bmi1
Pcgf4
Desc.Bmi1 polycomb ring finger oncogene
LocusNM_007552 chr2:18598645-18608256(+)
DB links


Entrez 12151
MGI 88174
Ensembl ENSMUSG00000026739
Vega OTTMUSG00000011429
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003411
(v2.0)
Bmi1NM_00755212151
26.4683179.16421.536409.713104.8525.7831626.2194282.946103.5876.47249
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003530
(v1.0)
Bmi112151
Major ZGA0.97684
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003411
(v2.0)
Bmi112151
913/3370.923646/3370.8207830/3374.85212675/3374.3098123/3370.5977784/3370.6173
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003411
(v2.0)
Bmi112151
326/1091.0609226/1090.9295359/1095.17251218/1094.781752/1090.9634309/1090.8978
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003411
(v2.0)
Bmi112151
25.617818214.08
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003411
(v2.0)
Bmi112151
6.8605858.07
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003530
(v1.0)
Bmi1NM_00755212151
186.143289.954304.89572.667118.4464
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003530
(v1.0)
Bmi1NM_00755212151
3426.774161.674665.21320.38347.29
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003530
(v1.0)
Bmi1NM_00755212151
194.639.67971316.346
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003530
(v1.0)
Bmi1NM_00755212151
189.978287.042209.194
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003530
(v1.0)
Bmi1NM_00755212151
1603.581280.9
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003530
(v1.0)
Bmi1NM_00755212151
194.7439.54714229.437
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003530
(v1.0)
Bmi1NM_00755212151
282.28570.16371.5364
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003530
(v1.0)
Bmi1NM_00755212151
553.082665.989
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003530
(v1.0)
Bmi1NM_00755212151
129.317403.411
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003530
(v1.0)
Bmi1NM_00755212151
59.1173174.878
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003530
(v1.0)
11376H3114C07-3237101
U042262NAP097174-001Bmi1TC793646P25916U,F,24.9064.92543.94424.3023.30493.33463.4447
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003530
(v1.0)
1448733_atMm.289584Bmi1NM_007552.412151
714.11344.7751770.4148.0594.55
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003530
(v1.0)
A_51_P121547Bmi1NM_00755212151
11P0.4220.0744P
0003530
(v1.0)
A_52_P39157Bmi1NM_00755212151
11P1.070.619P
Proteome N/A