DBTMEE:0003589
| Gene | Brca2 |
| Synonyms | Fancd1
RAB163 |
| Description | breast cancer 2 |
| Locus | NM_009765 UCSC: chr5:151325198-151372324(+) OLP: chr5:151325198-151372324(+)
NM_001081001 UCSC: chr5:151325205-151372324(+) OLP: chr5:151325205-151372324(+)
|
| DB links |
Entrez 12190
MGI 109337
Ensembl ENSMUSG00000041147
|
| Feature | protein-coding |
| GO_BP |
-
 38 Terms
|
| GO_MF |
-
6 Terms
|
| GO_CC |
-
6 Terms
|
| KEGG |
-
3 Terms
|
| Ver2_FPKM |
see DBTMEE:2003471 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0003589
(v1.0) | Brca2 | NM_001081001,NM_009765 | 12190
| 24.1979 | 18.8578 | 41.844 | 25.1175 | 2.85351 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0003589
(v1.0) | Brca2 | NM_001081001,NM_009765 | 12190
| 25.3011 | 0.229352 | 20.5742 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0003589
(v1.0) | Brca2 | NM_001081001,NM_009765 | 12190
| 24.6964 | 18.6684 | 14.2913 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0003589
(v1.0) | Brca2 | NM_001081001,NM_009765 | 12190
| 25.3158 | 0.226211 | 15.6742 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0003589
(v1.0) | Brca2 | NM_001081001,NM_009765 | 12190
| 38.7411 | 24.2519 | 41.212 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0003589
(v1.0) | Brca2 | NM_001081001,NM_009765 | 12190
| 66.8925 | 134.801 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0003589
(v1.0) | Brca2 | NM_001081001,NM_009765 | 12190
| 26.6903 | 32.1455 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0003589
(v1.0) | 8658 | H3069F08-3 | | Brca2 | 12190
| U006487 | NAP006302-001 | Brca2; | TC910555,TC910554 | P97929 | U,F,2 | 3.1176 | 3.1001 | 3.1343 | 3.1121 | 3.0023 | 2.9682 | 2.9796 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0003589
(v1.0) | 1419076_a_at | Mm.236256 | Brca2 | NM_001081001.1,NM_009765.2 | 12190
| 606.575 | 952 | 1232.57 | 414 | 265.85 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0003589
(v1.0) | A_51_P451106 | Brca2 | NM_009765 | 12190
| 1 | 1 | P | 1.075 | 0.602 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0003589
(v1.0) | Brca2 | 12190
| 1 | 0 | 0 | 1 | 0 | 0 |
|
