DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003591
GeneBrd1
Synonyms
Desc.bromodomain containing 1
LocusNM_001033274 chr15:88517465-88564649(-)
DB links


Entrez 223770
MGI 1924161
Ensembl ENSMUSG00000022387
Vega OTTMUSG00000017296
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003473
(v2.0)
Brd1NM_001033274223770
14.81628.055767.100179.037661.171824.4729.3375892.357970.132314.9541
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003591
(v1.0)
Brd1223770
2-Cell Transient0.84493
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003473
(v2.0)
Brd1223770
746/4870.1022473/487-0.1579401/4873.28881038/4872.417154/487-1.1009351/487-1.0685
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003473
(v2.0)
Brd1223770
374/1920.4471201/192-0.0498354/1924.3994897/1923.538116/192-1.4707123/192-1.2316
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003473
(v2.0)
Brd1223770
91.889817751.92
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003473
(v2.0)
Brd1223770
10.56148512.43
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003591
(v1.0)
Brd1NM_001033274223770
29.162646.506858.819142.3976.49723
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003591
(v1.0)
Brd1FR283611,NM_001033274223770
53.824379.829297.336680.248516.9674
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003591
(v1.0)
Brd1NM_001033274223770
30.49215.4183850.7399
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003591
(v1.0)
Brd1NM_001033274223770
29.763346.039868.34
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003591
(v1.0)
Brd1FR283611,NM_001033274223770
156.981156.696
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003591
(v1.0)
Brd1NM_001033274223770
30.50985.3441774.953
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003591
(v1.0)
Brd1NM_001033274223770
54.457340.93648.5357
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003591
(v1.0)
Brd1FR283611,NM_001033274223770
95.79395.7248
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003591
(v1.0)
Brd1NM_001033274223770
63.744248.0606
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003591
(v1.0)
Brd1NM_001033274223770
14.003725.793
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003591
(v1.0)
9459H3081F03-3Mm.34879LOC223770223770
U036513NAP003005-001TC935813U,F,24.23474.2213.45313.69383.11743.20953.2589
0003591
(v1.0)
15824K0249C01-3Mm.34879LOC223770223770
LOC2237702.4722.47342.63622.48252.28142.44042.225
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003591
(v1.0)
1434821_atMm.254438Brd1NM_001033274.3223770
325.65590.025676.725262.4199.375
0003591
(v1.0)
1438771_atMm.254438Brd1NM_001033274.3223770
457.35599.675464.85594.55545.075
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003591
(v1.0)
A_52_P408858Brd1XM_128275223770
11P0.5760.114P
0003591
(v1.0)
A_52_P445608Brd1XM_128275223770
11P0.80.267P
Proteome N/A