DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0003591

Gene

Brd1

Synonyms

Description

bromodomain containing 1

Locus

NM_001033274 UCSC: chr15:88517465-88564649(-) OLP: chr15:88517465-88564649(-)

DB links

Entrez 223770
MGI 1924161
Ensembl ENSMUSG00000022387
Vega OTTMUSG00000017296

Feature

protein-coding

GO_BP

1 Terms

GO_MF

2 Terms

GO_CC

2 Terms

KEGG

see DBTMEE:2003473 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0003591 (v1.0)	Brd1	NM_001033274	223770	29.1626	46.5068	58.8191	42.397	6.49723

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0003591 (v1.0)	Brd1	NM_001033274	223770	30.4921	5.41838	50.7399

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0003591 (v1.0)	Brd1	NM_001033274	223770	29.7633	46.0398	68.34

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0003591 (v1.0)	Brd1	NM_001033274	223770	30.5098	5.34417	74.953

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0003591 (v1.0)	Brd1	NM_001033274	223770	54.4573	40.936	48.5357

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0003591 (v1.0)	Brd1	NM_001033274	223770	63.7442	48.0606

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0003591 (v1.0)	Brd1	NM_001033274	223770	14.0037	25.793

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0003591 (v1.0)	9459	H3081F03-3	Mm.34879	LOC223770	223770	U036513	NAP003005-001		TC935813		U,F,2	4.2347	4.221	3.4531	3.6938	3.1174	3.2095	3.2589
0003591 (v1.0)	15824	K0249C01-3	Mm.34879	LOC223770	223770			LOC223770				2.472	2.4734	2.6362	2.4825	2.2814	2.4404	2.225

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0003591 (v1.0)	1434821_at	Mm.254438	Brd1	NM_001033274.3	223770	325.65	590.025	676.725	262.4	199.375
0003591 (v1.0)	1438771_at	Mm.254438	Brd1	NM_001033274.3	223770	457.35	599.675	464.85	594.55	545.075

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0003591 (v1.0)	A_52_P408858	Brd1	XM_128275	223770	1	1	P	0.576	0.114	P
0003591 (v1.0)	A_52_P445608	Brd1	XM_128275	223770	1	1	P	0.8	0.267	P

N/A