DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0003594
GeneBrd4
SynonymsHUNK1
MCAP
WI-11513
Desc.bromodomain containing 4
LocusNM_020508 chr17:32333219-32421068(-)
NM_198094 chr17:32343624-32421068(-)
DB links


Entrez 57261
MGI 1888520
Ensembl ENSMUSG00000024002
Vega OTTMUSG00000030241
Featureprotein-coding
GO(BP)
  •   9 Terms
      regulation of transcription involved in G1 phase of mitotic cell cycle (GO:0000114)
      inner cell mass cell proliferation (GO:0001833)
      protein phosphorylation (GO:0006468)
      chromosome segregation (GO:0007059)
      positive regulation of G2/M transition of mitotic cell cycle (GO:0010971)
      positive regulation of transcription elongation from RNA polymerase II promoter (GO:0032968)
      positive regulation of DNA binding (GO:0043388)
      histone H4-K12 acetylation (GO:0043983)
      histone H3-K14 acetylation (GO:0044154)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2003476
(v2.0)
Brd4NM_001286630,NM_020508,NM_19809457261
15.80345.4270711.785222.132121.453519.55918.4610920.616518.256216.9958
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0003594
(v1.0)
Brd457261
Major ZGA0.94772
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003476
(v2.0)
Brd457261
549/3200.2652358/3200.0455246/3203.1738483/3201.91696/320-3.4754104/320-2.2045
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2003476
(v2.0)
Brd457261
330/1300.8263172/1300.2857235/1304.3326443/1303.07572/130-3.425150/130-1.9459
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003476
(v2.0)
Brd457261
43.63729545.93
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2003476
(v2.0)
Brd457261
12.01126020.02
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003594
(v1.0)
Brd4NM_020508,NM_19809457261
5.64598.1529416.467414.82675.65232
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0003594
(v1.0)
Brd4NM_020508,NM_19809457261
24.782928.597573.382883.070430.8287
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0003594
(v1.0)
Brd4NM_020508,NM_19809457261
5.903315.782858.89504
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0003594
(v1.0)
Brd4NM_020508,NM_19809457261
5.762218.0710815.1613
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0003594
(v1.0)
Brd4NM_020508,NM_19809457261
45.655772.1212
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0003594
(v1.0)
Brd4NM_020508,NM_19809457261
5.906745.7036516.6284
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0003594
(v1.0)
Brd4NM_020508,NM_19809457261
15.246314.315712.6168
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0003594
(v1.0)
Brd4NM_020508,NM_19809457261
63.06955.9664
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0003594
(v1.0)
Brd4NM_020508,NM_19809457261
259.185178.439
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0003594
(v1.0)
Brd4NM_020508,NM_19809457261
37.103256.4843
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0003594
(v1.0)
560C0117F08-3Mm.143755Brd457261
U037661NAP095864-001Brd4;TC869624,TC869622Q9ESU6U,F,23.66383.7083.64833.66372.68573.28022.9975
0003594
(v1.0)
5471H3001A12-3Mm.143755Brd457261
U037661NAP095864-001Brd4;TC869622Q9ESU6U,F,23.59643.95863.64274.06573.74283.83943.8309
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0003594
(v1.0)
1450711_atMm.253518Brd4NM_020508.3,NM_198094.257261
533.7428.85493.45568.35476.375
0003594
(v1.0)
1451870_a_atMm.253518Brd4NM_020508.3,NM_198094.257261
22.3537.732.02500
0003594
(v1.0)
1424922_a_atMm.253518Brd4NM_020508.3,NM_198094.257261
0312000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0003594
(v1.0)
A_52_P142965Brd4NM_19809457261
11P0.5280.099P
0003594
(v1.0)
A_52_P494230Brd4NM_02050857261
11P0.2280.0431P
Proteome N/A